Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C2H93_RS19185 | Genome accession | NZ_CP026036 |
| Coordinates | 3751482..3751772 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain PK5_16 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3746482..3756772
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H93_RS19145 (C2H93_19150) | darA | 3746505..3746834 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| C2H93_RS19150 (C2H93_19155) | yaaR | 3746847..3747287 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| C2H93_RS19155 (C2H93_19160) | holB | 3747299..3748288 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| C2H93_RS19160 (C2H93_19165) | ricT | 3748291..3749118 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| C2H93_RS19165 (C2H93_19170) | yabA | 3749133..3749492 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| C2H93_RS19170 (C2H93_19175) | trmNF | 3749551..3750294 (+) | 744 | WP_249852462.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C2H93_RS19175 (C2H93_19180) | yazA | 3750281..3750580 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| C2H93_RS19180 (C2H93_19185) | rsmI | 3750555..3751433 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C2H93_RS19185 (C2H93_19190) | abrB | 3751482..3751772 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C2H93_RS19190 (C2H93_19195) | metG | 3752267..3754261 (+) | 1995 | WP_021479730.1 | methionine--tRNA ligase | - |
| C2H93_RS19195 (C2H93_19200) | dayD | 3754341..3755108 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| C2H93_RS19200 (C2H93_19205) | yabE | 3755264..3756577 (+) | 1314 | WP_101502497.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=265656 C2H93_RS19185 WP_003226760.1 3751482..3751772(-) (abrB) [Bacillus subtilis strain PK5_16]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=265656 C2H93_RS19185 WP_003226760.1 3751482..3751772(-) (abrB) [Bacillus subtilis strain PK5_16]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |