Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | C2H93_RS10985 | Genome accession | NZ_CP026036 |
| Coordinates | 2156550..2156960 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain PK5_16 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2151550..2161960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H93_RS10955 (C2H93_10975) | - | 2151636..2151776 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| C2H93_RS10960 (C2H93_10980) | yqeF | 2152082..2152813 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| C2H93_RS10965 (C2H93_10985) | cwlH | 2153065..2153817 (-) | 753 | WP_021480067.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| C2H93_RS10970 (C2H93_10990) | yqeD | 2154004..2154630 (+) | 627 | WP_021480068.1 | TVP38/TMEM64 family protein | - |
| C2H93_RS10975 (C2H93_10995) | gnd | 2154650..2155543 (-) | 894 | WP_041850033.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| C2H93_RS10980 (C2H93_11000) | yqeB | 2155795..2156517 (+) | 723 | WP_049141193.1 | hypothetical protein | - |
| C2H93_RS10985 (C2H93_11005) | nucA/comI | 2156550..2156960 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| C2H93_RS10990 (C2H93_11010) | sigK | 2157156..2157884 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| C2H93_RS10995 | - | 2157884..2158000 (+) | 117 | WP_070547560.1 | hypothetical protein | - |
| C2H93_RS11000 (C2H93_11015) | - | 2157966..2158163 (-) | 198 | Protein_2165 | recombinase family protein | - |
| C2H93_RS11005 | - | 2158121..2158272 (-) | 152 | Protein_2166 | hypothetical protein | - |
| C2H93_RS11010 (C2H93_11020) | psiE | 2158816..2159232 (-) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| C2H93_RS11015 (C2H93_11025) | yrkQ | 2159278..2160576 (-) | 1299 | WP_249852193.1 | two-component system sensor histidine kinase YrkQ | - |
| C2H93_RS11020 (C2H93_11030) | yrkP | 2160563..2161258 (-) | 696 | WP_021480140.1 | two-component response regulator YrkP | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=265629 C2H93_RS10985 WP_009967785.1 2156550..2156960(-) (nucA/comI) [Bacillus subtilis strain PK5_16]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=265629 C2H93_RS10985 WP_009967785.1 2156550..2156960(-) (nucA/comI) [Bacillus subtilis strain PK5_16]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCAATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCAATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |