Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C2H93_RS05940 Genome accession   NZ_CP026036
Coordinates   1139919..1140503 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain PK5_16     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1134919..1145503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS05910 (C2H93_05925) dapD 1135107..1135817 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C2H93_RS05915 (C2H93_05930) dapI 1135887..1137011 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  C2H93_RS05920 (C2H93_05935) ykuS 1137073..1137318 (+) 246 WP_003232382.1 YkuS family protein -
  C2H93_RS05925 (C2H93_05940) mscT 1137355..1138158 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C2H93_RS05930 (C2H93_05945) ahpA 1138395..1138937 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C2H93_RS05935 (C2H93_05950) ykuV 1139007..1139453 (+) 447 WP_249852671.1 thiol-disulfide oxidoreductase YkuV -
  C2H93_RS05940 (C2H93_05955) rok 1139919..1140503 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  C2H93_RS05945 (C2H93_05960) cse15 1140544..1141509 (-) 966 WP_021479381.1 spore protein Cse15 -
  C2H93_RS05950 (C2H93_05965) mobA 1141646..1142245 (+) 600 WP_064671331.1 molybdenum cofactor guanylyltransferase -
  C2H93_RS05955 (C2H93_05970) moeB 1142296..1143315 (+) 1020 WP_072174089.1 molybdopterin-synthase adenylyltransferase MoeB -
  C2H93_RS05960 (C2H93_05975) glp 1143333..1144625 (+) 1293 WP_072174088.1 gephyrin-like molybdotransferase Glp -
  C2H93_RS05965 (C2H93_05980) mobB 1144586..1145107 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=265607 C2H93_RS05940 WP_014113628.1 1139919..1140503(+) (rok) [Bacillus subtilis strain PK5_16]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=265607 C2H93_RS05940 WP_014113628.1 1139919..1140503(+) (rok) [Bacillus subtilis strain PK5_16]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment