Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C2H93_RS02830 Genome accession   NZ_CP026036
Coordinates   575895..576689 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_16     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 570895..581689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS02800 (C2H93_02810) sxzA 571734..572765 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  C2H93_RS02805 (C2H93_02815) yfhB 572880..573761 (+) 882 WP_249852591.1 PhzF family phenazine biosynthesis isomerase -
  C2H93_RS02810 (C2H93_02820) yfhC 573849..574433 (+) 585 WP_249852592.1 nitroreductase -
  C2H93_RS02815 (C2H93_02825) yfhD 574472..574663 (-) 192 WP_003233561.1 YfhD family protein -
  C2H93_RS02820 (C2H93_02830) yfhE 574730..574840 (-) 111 WP_003223230.1 YfhE family protein -
  C2H93_RS02825 (C2H93_02835) yfhF 574895..575806 (-) 912 WP_169038027.1 TIGR01777 family oxidoreductase -
  C2H93_RS02830 (C2H93_02840) recX 575895..576689 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  C2H93_RS02835 (C2H93_02845) yfhH 576691..577005 (+) 315 WP_003244592.1 YfhH family protein -
  C2H93_RS02840 (C2H93_02850) yfhI 577148..578341 (+) 1194 WP_080474520.1 MFS transporter -
  C2H93_RS02845 (C2H93_02855) sspK 578373..578525 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C2H93_RS02850 (C2H93_02860) yfhJ 578650..578919 (+) 270 WP_003243789.1 YfhJ family protein -
  C2H93_RS02855 (C2H93_02865) yfhK 579064..579582 (+) 519 WP_249852593.1 SH3 domain-containing protein -
  C2H93_RS02860 (C2H93_02870) spdL 579667..579984 (+) 318 WP_249852594.1 SdpC immunity protein SpdL -
  C2H93_RS02865 (C2H93_02875) ephM 579986..580846 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=265589 C2H93_RS02830 WP_029726844.1 575895..576689(+) (recX) [Bacillus subtilis strain PK5_16]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=265589 C2H93_RS02830 WP_029726844.1 575895..576689(+) (recX) [Bacillus subtilis strain PK5_16]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment