Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C2H96_RS09375 Genome accession   NZ_CP026035
Coordinates   1857807..1857947 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain PK5_68     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1852807..1862947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS09370 - 1856689..1857861 (-) 1173 Protein_1841 condensation domain-containing protein -
  C2H96_RS09375 comS 1857807..1857947 (-) 141 WP_010886404.1 competence protein ComS Regulator
  C2H96_RS09380 srfAB 1858039..1861083 (-) 3045 Protein_1843 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=265532 C2H96_RS09375 WP_010886404.1 1857807..1857947(-) (comS) [Bacillus subtilis strain PK5_68]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=265532 C2H96_RS09375 WP_010886404.1 1857807..1857947(-) (comS) [Bacillus subtilis strain PK5_68]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment