Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C2H96_RS06610 Genome accession   NZ_CP026035
Coordinates   1311064..1311858 (-) Length   264 a.a.
NCBI ID   WP_021481166.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_68     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1306064..1316858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS06575 (C2H96_06495) ephM 1306907..1307767 (-) 861 WP_072173355.1 epoxide hydrolase EphM -
  C2H96_RS06580 (C2H96_06500) spdL 1307754..1308086 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  C2H96_RS06585 (C2H96_06505) yfhK 1308171..1308689 (-) 519 WP_015252515.1 SH3 domain-containing protein -
  C2H96_RS06590 (C2H96_06510) yfhJ 1308834..1309103 (-) 270 WP_003243789.1 YfhJ family protein -
  C2H96_RS06595 (C2H96_06515) sspK 1309228..1309380 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C2H96_RS06600 (C2H96_06520) yfhI 1309412..1310605 (-) 1194 WP_080474520.1 MFS transporter -
  C2H96_RS06605 (C2H96_06525) yfhH 1310748..1311062 (-) 315 WP_003244592.1 YfhH family protein -
  C2H96_RS06610 (C2H96_06530) recX 1311064..1311858 (-) 795 WP_021481166.1 recombination regulator RecX Regulator
  C2H96_RS06615 (C2H96_06535) yfhF 1311947..1312858 (+) 912 WP_103803364.1 TIGR01777 family oxidoreductase -
  C2H96_RS06620 (C2H96_06540) yfhE 1312913..1313023 (+) 111 WP_003223230.1 YfhE family protein -
  C2H96_RS06625 (C2H96_06545) yfhD 1313089..1313280 (+) 192 WP_003233561.1 YfhD family protein -
  C2H96_RS06630 (C2H96_06550) yfhC 1313319..1313903 (-) 585 WP_003243940.1 nitroreductase -
  C2H96_RS06635 (C2H96_06555) yfhB 1313991..1314872 (-) 882 WP_120027911.1 PhzF family phenazine biosynthesis isomerase -
  C2H96_RS06640 (C2H96_06560) sxzA 1314987..1316018 (-) 1032 WP_003233568.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31025.29 Da        Isoelectric Point: 6.6686

>NTDB_id=265527 C2H96_RS06610 WP_021481166.1 1311064..1311858(-) (recX) [Bacillus subtilis strain PK5_68]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=265527 C2H96_RS06610 WP_021481166.1 1311064..1311858(-) (recX) [Bacillus subtilis strain PK5_68]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment