Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C2H96_RS03470 Genome accession   NZ_CP026035
Coordinates   739558..740142 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain PK5_68     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 734558..745142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS03445 (C2H96_03380) mobB 734954..735475 (-) 522 WP_064671333.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  C2H96_RS03450 (C2H96_03385) glp 735436..736728 (-) 1293 WP_249848245.1 gephyrin-like molybdotransferase Glp -
  C2H96_RS03455 (C2H96_03390) moeB 736746..737765 (-) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -
  C2H96_RS03460 (C2H96_03395) mobA 737816..738415 (-) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  C2H96_RS03465 (C2H96_03400) cse15 738552..739517 (+) 966 WP_032725607.1 spore protein Cse15 -
  C2H96_RS03470 (C2H96_03405) rok 739558..740142 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  C2H96_RS03475 (C2H96_03410) ykuV 740608..741054 (-) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  C2H96_RS03480 (C2H96_03415) ahpA 741125..741667 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C2H96_RS03485 (C2H96_03420) mscT 741904..742707 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C2H96_RS03490 (C2H96_03425) ykuS 742744..742989 (-) 246 WP_003232382.1 YkuS family protein -
  C2H96_RS03495 (C2H96_03430) dapI 743051..744175 (-) 1125 WP_049139865.1 N-acetyldiaminopimelate deacetylase -
  C2H96_RS03500 (C2H96_03435) dapD 744245..744955 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=265509 C2H96_RS03470 WP_014113628.1 739558..740142(-) (rok) [Bacillus subtilis strain PK5_68]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=265509 C2H96_RS03470 WP_014113628.1 739558..740142(-) (rok) [Bacillus subtilis strain PK5_68]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGAGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment