Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C2H94_RS18010 Genome accession   NZ_CP026034
Coordinates   3415592..3416176 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain PK5_52     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3410592..3421176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS17980 (C2H94_17910) dapD 3410780..3411490 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C2H94_RS17985 (C2H94_17915) dapI 3411560..3412684 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  C2H94_RS17990 (C2H94_17920) ykuS 3412746..3412991 (+) 246 WP_003232382.1 YkuS family protein -
  C2H94_RS17995 (C2H94_17925) mscT 3413028..3413831 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C2H94_RS18000 (C2H94_17930) ahpA 3414068..3414610 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C2H94_RS18005 (C2H94_17935) ykuV 3414680..3415126 (+) 447 WP_041850881.1 thiol-disulfide oxidoreductase YkuV -
  C2H94_RS18010 (C2H94_17940) rok 3415592..3416176 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  C2H94_RS18015 (C2H94_17945) cse15 3416217..3417182 (-) 966 WP_072175386.1 spore protein Cse15 -
  C2H94_RS18020 (C2H94_17950) mobA 3417319..3417918 (+) 600 WP_072175385.1 molybdenum cofactor guanylyltransferase -
  C2H94_RS18025 (C2H94_17955) moeB 3417969..3418988 (+) 1020 WP_041335765.1 molybdopterin-synthase adenylyltransferase MoeB -
  C2H94_RS18030 (C2H94_17960) glp 3419006..3420298 (+) 1293 WP_167569062.1 gephyrin-like molybdotransferase Glp -
  C2H94_RS18035 (C2H94_17965) mobB 3420259..3420780 (+) 522 WP_032725609.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=265497 C2H94_RS18010 WP_014113628.1 3415592..3416176(+) (rok) [Bacillus subtilis strain PK5_52]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=265497 C2H94_RS18010 WP_014113628.1 3415592..3416176(+) (rok) [Bacillus subtilis strain PK5_52]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment