Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C2H94_RS17910 Genome accession   NZ_CP026034
Coordinates   3399747..3400211 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain PK5_52     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3394747..3405211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS17890 (C2H94_17820) kinA 3395214..3397034 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  C2H94_RS17895 (C2H94_17825) dapX 3397044..3398225 (-) 1182 WP_021479391.1 aminotransferase A -
  C2H94_RS17900 (C2H94_17830) - 3398427..3398588 (-) 162 WP_014476654.1 hypothetical protein -
  C2H94_RS17905 (C2H94_17835) cheV 3398792..3399703 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  C2H94_RS17910 (C2H94_17840) kre 3399747..3400211 (-) 465 WP_003232406.1 YkyB family protein Regulator
  C2H94_RS17915 (C2H94_17845) ykuC 3400337..3401629 (-) 1293 WP_014479656.1 MFS transporter -
  C2H94_RS17920 (C2H94_17850) ltdD 3401705..3402199 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  C2H94_RS17925 (C2H94_17855) ppeE 3402256..3403116 (-) 861 WP_041850886.1 metallophosphoesterase -
  C2H94_RS17930 (C2H94_17860) fadH 3403259..3404023 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=265496 C2H94_RS17910 WP_003232406.1 3399747..3400211(-) (kre) [Bacillus subtilis strain PK5_52]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=265496 C2H94_RS17910 WP_003232406.1 3399747..3400211(-) (kre) [Bacillus subtilis strain PK5_52]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment