Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   C2H94_RS16425 Genome accession   NZ_CP026034
Coordinates   3130765..3130956 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PK5_52     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 3125765..3135956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS16395 (C2H94_16330) argF 3126629..3127588 (+) 960 WP_021479560.1 ornithine carbamoyltransferase -
  C2H94_RS16400 (C2H94_16335) yjzC 3127674..3127853 (+) 180 WP_003245356.1 YjzC family protein -
  C2H94_RS16405 (C2H94_16340) yjzD 3127899..3128084 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C2H94_RS16410 (C2H94_16345) - 3128333..3129067 (+) 735 WP_003245223.1 hypothetical protein -
  C2H94_RS16415 (C2H94_16350) - 3129149..3129706 (+) 558 WP_125121305.1 hypothetical protein -
  C2H94_RS16420 (C2H94_16355) med 3129797..3130750 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C2H94_RS16425 (C2H94_16360) comZ 3130765..3130956 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C2H94_RS16430 (C2H94_16365) yjzB 3130986..3131222 (-) 237 WP_072173825.1 spore coat protein YjzB -
  C2H94_RS16435 (C2H94_16370) fabH 3131386..3132324 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C2H94_RS16440 (C2H94_16375) fabF 3132347..3133588 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C2H94_RS16445 (C2H94_16380) yjaZ 3133664..3134449 (+) 786 WP_049140720.1 DUF2268 domain-containing protein -
  C2H94_RS16450 (C2H94_16385) appD 3134641..3135627 (+) 987 WP_049140721.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=265488 C2H94_RS16425 WP_003224559.1 3130765..3130956(+) (comZ) [Bacillus subtilis strain PK5_52]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=265488 C2H94_RS16425 WP_003224559.1 3130765..3130956(+) (comZ) [Bacillus subtilis strain PK5_52]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment