Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C2H94_RS14885 Genome accession   NZ_CP026034
Coordinates   2848438..2849232 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain PK5_52     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2843438..2854232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS14855 (C2H94_14790) sxzA 2844277..2845308 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  C2H94_RS14860 (C2H94_14795) yfhB 2845423..2846304 (+) 882 WP_125121377.1 PhzF family phenazine biosynthesis isomerase -
  C2H94_RS14865 (C2H94_14800) yfhC 2846392..2846976 (+) 585 WP_003243940.1 nitroreductase -
  C2H94_RS14870 (C2H94_14805) yfhD 2847015..2847206 (-) 192 WP_003233561.1 YfhD family protein -
  C2H94_RS14875 (C2H94_14810) yfhE 2847273..2847383 (-) 111 WP_003223230.1 YfhE family protein -
  C2H94_RS14880 (C2H94_14815) yfhF 2847438..2848349 (-) 912 WP_103803364.1 TIGR01777 family oxidoreductase -
  C2H94_RS14885 (C2H94_14820) recX 2848438..2849232 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  C2H94_RS14890 (C2H94_14825) yfhH 2849234..2849548 (+) 315 WP_003244592.1 YfhH family protein -
  C2H94_RS14895 (C2H94_14830) yfhI 2849691..2850884 (+) 1194 WP_003243500.1 MFS transporter -
  C2H94_RS14900 (C2H94_14835) sspK 2850916..2851068 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C2H94_RS14905 (C2H94_14840) yfhJ 2851194..2851463 (+) 270 WP_003243789.1 YfhJ family protein -
  C2H94_RS14910 (C2H94_14845) yfhK 2851608..2852126 (+) 519 WP_125121375.1 SH3 domain-containing protein -
  C2H94_RS14915 (C2H94_14850) spdL 2852211..2852543 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  C2H94_RS14920 (C2H94_14855) ephM 2852530..2853390 (+) 861 WP_125121374.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=265479 C2H94_RS14885 WP_003243354.1 2848438..2849232(+) (recX) [Bacillus subtilis strain PK5_52]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=265479 C2H94_RS14885 WP_003243354.1 2848438..2849232(+) (recX) [Bacillus subtilis strain PK5_52]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment