Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C2H94_RS12345 Genome accession   NZ_CP026034
Coordinates   2340142..2340282 (+) Length   46 a.a.
NCBI ID   WP_229762786.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_52     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2335142..2345282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS12340 srfAB 2337075..2340050 (+) 2976 Protein_2384 surfactin non-ribosomal peptide synthetase SrfAB -
  C2H94_RS12345 comS 2340142..2340282 (+) 141 WP_229762786.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5304.14 Da        Isoelectric Point: 9.2422

>NTDB_id=265474 C2H94_RS12345 WP_229762786.1 2340142..2340282(+) (comS) [Bacillus subtilis strain PK5_52]
MNRSGKHLISSIILYPRPSGECIFSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=265474 C2H94_RS12345 WP_229762786.1 2340142..2340282(+) (comS) [Bacillus subtilis strain PK5_52]
TTGAATCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATTCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment