Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   C2H91_RS18745 Genome accession   NZ_CP026030
Coordinates   3725374..3726177 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK3_9     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3720374..3731177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS18725 (C2H91_18750) yqxC 3720486..3721331 (+) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  C2H91_RS18730 (C2H91_18755) argR 3721429..3721878 (+) 450 WP_014114358.1 arginine repressor ArgR -
  C2H91_RS18735 (C2H91_18760) recN 3721913..3723643 (+) 1731 WP_017696435.1 DNA repair protein RecN Machinery gene
  C2H91_RS18740 (C2H91_18765) spoIVB 3723818..3725098 (+) 1281 WP_021480004.1 SpoIVB peptidase -
  C2H91_RS18745 (C2H91_18770) spo0A 3725374..3726177 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  C2H91_RS18750 (C2H91_18775) yqiG 3726642..3727760 (-) 1119 WP_049141220.1 NADH-dependent flavin oxidoreductase -
  C2H91_RS18755 - 3727833..3727985 (-) 153 WP_014480226.1 hypothetical protein -
  C2H91_RS18760 (C2H91_18780) - 3728293..3728586 (+) 294 WP_249850944.1 hypothetical protein -
  C2H91_RS18765 (C2H91_18785) yqiI 3728601..3729221 (+) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  C2H91_RS18770 (C2H91_18790) glpQ 3729300..3730031 (+) 732 WP_049141221.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=265314 C2H91_RS18745 WP_003226427.1 3725374..3726177(+) (spo0A) [Bacillus subtilis strain PK3_9]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=265314 C2H91_RS18745 WP_003226427.1 3725374..3726177(+) (spo0A) [Bacillus subtilis strain PK3_9]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment