Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   C2H91_RS18210 Genome accession   NZ_CP026030
Coordinates   3634490..3635257 (+) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus subtilis strain PK3_9     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 3629490..3640257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS18180 (C2H91_18195) pgpH 3629786..3631921 (+) 2136 WP_249850934.1 cyclic-di-AMP phosphodiesterase PgpH -
  C2H91_RS18185 (C2H91_18200) ybeY 3631922..3632395 (+) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  C2H91_RS18190 (C2H91_18205) unpK 3632376..3632747 (+) 372 WP_047182891.1 diacylglycerol kinase family protein -
  C2H91_RS18195 (C2H91_18210) cdd 3632866..3633276 (+) 411 WP_003230049.1 cytidine deaminase -
  C2H91_RS18200 (C2H91_18215) era 3633257..3634162 (+) 906 WP_003230051.1 GTPase Era -
  C2H91_RS18205 (C2H91_18220) yqzL 3634310..3634453 (+) 144 WP_003230053.1 YqzL family protein -
  C2H91_RS18210 (C2H91_18225) recO 3634490..3635257 (+) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  C2H91_RS18215 (C2H91_18230) glyQ 3635555..3636442 (+) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  C2H91_RS18220 (C2H91_18235) glyS 3636435..3638474 (+) 2040 WP_249850935.1 glycine--tRNA ligase subunit beta -
  C2H91_RS18225 (C2H91_18240) ccpN 3638607..3639245 (+) 639 WP_003237058.1 transcriptional regulator CcpN -
  C2H91_RS18230 (C2H91_18245) ppsR 3639271..3640083 (+) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=265303 C2H91_RS18210 WP_014477369.1 3634490..3635257(+) (recO) [Bacillus subtilis strain PK3_9]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=265303 C2H91_RS18210 WP_014477369.1 3634490..3635257(+) (recO) [Bacillus subtilis strain PK3_9]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACATTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAATTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAACCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATTAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment