Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   C2H91_RS15110 Genome accession   NZ_CP026030
Coordinates   3048372..3049016 (+) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK3_9     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3043372..3054016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS15080 (C2H91_15115) - 3043795..3044163 (-) 369 WP_017695529.1 hypothetical protein -
  C2H91_RS15085 - 3044341..3044403 (-) 63 Protein_2936 hypothetical protein -
  C2H91_RS15090 (C2H91_15120) degQ 3044625..3044765 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C2H91_RS15095 (C2H91_15125) - 3044950..3045810 (+) 861 WP_032677058.1 polyprenyl synthetase family protein -
  C2H91_RS15100 (C2H91_15130) comX 3045825..3045986 (+) 162 WP_049140565.1 competence pheromone ComX -
  C2H91_RS15105 (C2H91_15135) comP 3045994..3048291 (+) 2298 WP_141949158.1 histidine kinase Regulator
  C2H91_RS15110 (C2H91_15140) comA 3048372..3049016 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C2H91_RS15115 (C2H91_15145) yuxO 3049035..3049415 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C2H91_RS15120 (C2H91_15150) mnhG 3049454..3049828 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  C2H91_RS15125 (C2H91_15155) mrpF 3049812..3050096 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C2H91_RS15130 (C2H91_15160) mrpE 3050096..3050572 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  C2H91_RS15135 (C2H91_15165) mrpD 3050578..3052059 (-) 1482 WP_043940184.1 Na+/H+ antiporter subunit D -
  C2H91_RS15140 (C2H91_15170) mrpC 3052052..3052393 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  C2H91_RS15145 (C2H91_15175) mrpB 3052393..3052824 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=265290 C2H91_RS15110 WP_003220716.1 3048372..3049016(+) (comA) [Bacillus subtilis strain PK3_9]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=265290 C2H91_RS15110 WP_003220716.1 3048372..3049016(+) (comA) [Bacillus subtilis strain PK3_9]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment