Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   C2H91_RS04005 Genome accession   NZ_CP026030
Coordinates   860037..861158 (-) Length   373 a.a.
NCBI ID   WP_249851319.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK3_9     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 855037..866158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS03980 (C2H91_03965) cwlQ 855176..855910 (+) 735 WP_249851133.1 bifunctional muramidase/murein lytic transglycosylase -
  C2H91_RS03985 (C2H91_03970) yjbI 856165..856563 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  C2H91_RS03990 (C2H91_03975) spxH 856560..857459 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  C2H91_RS03995 (C2H91_03985) - 857773..857940 (+) 168 WP_003244944.1 hypothetical protein -
  C2H91_RS04000 (C2H91_03990) pepF 857978..859807 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  C2H91_RS04005 (C2H91_03995) coiA 860037..861158 (-) 1122 WP_249851319.1 competence protein CoiA Machinery gene
  C2H91_RS04010 - 861232..861354 (+) 123 WP_021479547.1 hypothetical protein -
  C2H91_RS04015 (C2H91_04000) mecA 861349..862005 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  C2H91_RS04020 - 861972..862112 (-) 141 WP_119122854.1 hypothetical protein -
  C2H91_RS04025 (C2H91_04005) yjbE 862282..862938 (+) 657 WP_038828809.1 TerC family protein -
  C2H91_RS04030 (C2H91_04010) spx 862984..863379 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  C2H91_RS04035 (C2H91_04015) yjbC 863560..864138 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  C2H91_RS04040 (C2H91_04020) yjbB 864302..865519 (-) 1218 WP_072175656.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43799.77 Da        Isoelectric Point: 10.0036

>NTDB_id=265247 C2H91_RS04005 WP_249851319.1 860037..861158(-) (coiA) [Bacillus subtilis strain PK3_9]
MFHLLGAQQNQKLKQRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSFQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=265247 C2H91_RS04005 WP_249851319.1 860037..861158(-) (coiA) [Bacillus subtilis strain PK3_9]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCAGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAATCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATTAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCATTTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

100

0.984


Multiple sequence alignment