Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C2H91_RS02495 Genome accession   NZ_CP026030
Coordinates   570916..571491 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK3_9     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 565916..576491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS02470 (C2H91_02460) mobB 566312..566833 (-) 522 WP_049139878.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  C2H91_RS02475 (C2H91_02465) glp 566794..568086 (-) 1293 WP_249851072.1 gephyrin-like molybdotransferase Glp -
  C2H91_RS02480 (C2H91_02470) moeB 568104..569123 (-) 1020 WP_249851073.1 molybdopterin-synthase adenylyltransferase MoeB -
  C2H91_RS02485 (C2H91_02475) mobA 569174..569773 (-) 600 WP_160243959.1 molybdenum cofactor guanylyltransferase -
  C2H91_RS02490 (C2H91_02480) cse15 569910..570875 (+) 966 WP_249851074.1 spore protein Cse15 -
  C2H91_RS02495 (C2H91_02485) rok 570916..571491 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  C2H91_RS02500 (C2H91_02490) ykuV 571957..572403 (-) 447 WP_249851075.1 thiol-disulfide oxidoreductase YkuV -
  C2H91_RS02505 (C2H91_02495) ahpA 572474..573016 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C2H91_RS02510 (C2H91_02500) mscT 573253..574056 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C2H91_RS02515 (C2H91_02505) ykuS 574093..574338 (-) 246 WP_003232382.1 YkuS family protein -
  C2H91_RS02520 (C2H91_02510) dapI 574400..575524 (-) 1125 WP_043857415.1 N-acetyldiaminopimelate deacetylase -
  C2H91_RS02525 (C2H91_02515) dapD 575594..576304 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=265242 C2H91_RS02495 WP_003232378.1 570916..571491(-) (rok) [Bacillus subtilis strain PK3_9]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=265242 C2H91_RS02495 WP_003232378.1 570916..571491(-) (rok) [Bacillus subtilis strain PK3_9]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCAGCTGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment