Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BS11774_RS13775 Genome accession   NZ_CP026010
Coordinates   2601515..2602090 (+) Length   191 a.a.
NCBI ID   WP_128473870.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2596515..2607090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS13745 (BS11774_13675) dapD 2596702..2597412 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BS11774_RS13750 (BS11774_13680) dapI 2597482..2598606 (+) 1125 WP_128473869.1 N-acetyldiaminopimelate deacetylase -
  BS11774_RS13755 (BS11774_13685) ykuS 2598668..2598913 (+) 246 WP_003232382.1 YkuS family protein -
  BS11774_RS13760 (BS11774_13690) mscT 2598950..2599753 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BS11774_RS13765 (BS11774_13695) ahpA 2599990..2600532 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BS11774_RS13770 (BS11774_13700) ykuV 2600603..2601049 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  BS11774_RS13775 (BS11774_13705) rok 2601515..2602090 (+) 576 WP_128473870.1 transcriptional regulator Rok Regulator
  BS11774_RS13780 (BS11774_13710) cse15 2602131..2603096 (-) 966 WP_128473871.1 spore protein Cse15 -
  BS11774_RS13785 (BS11774_13715) mobA 2603233..2603832 (+) 600 WP_128473872.1 molybdenum cofactor guanylyltransferase -
  BS11774_RS13790 (BS11774_13720) moeB 2603883..2604902 (+) 1020 WP_128473873.1 molybdopterin-synthase adenylyltransferase MoeB -
  BS11774_RS13795 (BS11774_13725) glp 2604920..2606212 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  BS11774_RS13800 (BS11774_13730) mobB 2606173..2606694 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21838.91 Da        Isoelectric Point: 9.8633

>NTDB_id=264993 BS11774_RS13775 WP_128473870.1 2601515..2602090(+) (rok) [Bacillus subtilis strain ATCC 11774]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRIGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=264993 BS11774_RS13775 WP_128473870.1 2601515..2602090(+) (rok) [Bacillus subtilis strain ATCC 11774]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAATTGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.476

100

0.995

Multiple sequence alignment