Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   BS11774_RS12125 Genome accession   NZ_CP026010
Coordinates   2310202..2310393 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain ATCC 11774     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 2305202..2315393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS12095 (BS11774_12045) argF 2306066..2307025 (+) 960 WP_128473810.1 ornithine carbamoyltransferase -
  BS11774_RS12100 (BS11774_12050) yjzC 2307110..2307289 (+) 180 WP_003245356.1 YjzC family protein -
  BS11774_RS12105 (BS11774_12055) yjzD 2307336..2307521 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  BS11774_RS12110 (BS11774_12060) - 2307770..2308504 (+) 735 WP_041340422.1 hypothetical protein -
  BS11774_RS12115 (BS11774_12065) - 2308586..2309143 (+) 558 WP_041351861.1 hypothetical protein -
  BS11774_RS12120 (BS11774_12070) med 2309234..2310187 (+) 954 WP_041351863.1 transcriptional regulator Med Regulator
  BS11774_RS12125 (BS11774_12075) comZ 2310202..2310393 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  BS11774_RS12130 (BS11774_12080) yjzB 2310423..2310650 (-) 228 WP_121591633.1 spore coat protein YjzB -
  BS11774_RS12135 (BS11774_12085) fabH 2310815..2311753 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  BS11774_RS12140 (BS11774_12090) fabF 2311776..2313017 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  BS11774_RS12145 (BS11774_12095) yjaZ 2313093..2313878 (+) 786 WP_041340409.1 DUF2268 domain-containing protein -
  BS11774_RS12150 (BS11774_12100) appD 2314071..2315057 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=264984 BS11774_RS12125 WP_003224559.1 2310202..2310393(+) (comZ) [Bacillus subtilis strain ATCC 11774]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=264984 BS11774_RS12125 WP_003224559.1 2310202..2310393(+) (comZ) [Bacillus subtilis strain ATCC 11774]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTTTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment