Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BS11774_RS10490 Genome accession   NZ_CP026010
Coordinates   2009463..2010257 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2004463..2015257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS10460 (BS11774_10410) sxzA 2005303..2006334 (+) 1032 WP_029317459.1 iron ABC transporter permease -
  BS11774_RS10465 (BS11774_10415) yfhB 2006449..2007330 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  BS11774_RS10470 (BS11774_10420) yfhC 2007418..2008002 (+) 585 WP_003243940.1 nitroreductase -
  BS11774_RS10475 (BS11774_10425) yfhD 2008041..2008232 (-) 192 WP_003233561.1 YfhD family protein -
  BS11774_RS10480 (BS11774_10430) - 2008299..2008430 (-) 132 WP_041351182.1 YfhE family protein -
  BS11774_RS10485 (BS11774_10435) yfhF 2008463..2009374 (-) 912 WP_128473734.1 TIGR01777 family oxidoreductase -
  BS11774_RS10490 (BS11774_10440) recX 2009463..2010257 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  BS11774_RS10495 (BS11774_10445) yfhH 2010259..2010573 (+) 315 WP_003244592.1 YfhH family protein -
  BS11774_RS10500 (BS11774_10450) yfhI 2010716..2011909 (+) 1194 WP_128473735.1 MFS transporter -
  BS11774_RS10505 (BS11774_10455) sspK 2011942..2012094 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BS11774_RS10510 (BS11774_10460) yfhJ 2012219..2012488 (+) 270 WP_003243789.1 YfhJ family protein -
  BS11774_RS10520 (BS11774_10470) yfhK 2013923..2014425 (+) 503 Protein_2009 SH3 domain-containing protein -
  BS11774_RS10525 (BS11774_10475) spdL 2014510..2014827 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=264975 BS11774_RS10490 WP_029726844.1 2009463..2010257(+) (recX) [Bacillus subtilis strain ATCC 11774]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=264975 BS11774_RS10490 WP_029726844.1 2009463..2010257(+) (recX) [Bacillus subtilis strain ATCC 11774]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGTTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTACTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment