Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   BS11774_RS00535 Genome accession   NZ_CP026010
Coordinates   90375..91019 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 85375..96019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS00500 (BS11774_00495) mrpB 86565..86996 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  BS11774_RS00505 (BS11774_00500) mrpC 86996..87337 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  BS11774_RS00510 (BS11774_00505) mrpD 87330..88811 (+) 1482 WP_128473218.1 Na+/H+ antiporter subunit D -
  BS11774_RS00515 (BS11774_00510) mrpE 88817..89293 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BS11774_RS00520 (BS11774_00515) mrpF 89293..89577 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BS11774_RS00525 (BS11774_00520) mnhG 89561..89935 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  BS11774_RS00530 (BS11774_00525) yuxO 89976..90356 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  BS11774_RS00535 (BS11774_00530) comA 90375..91019 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BS11774_RS00540 (BS11774_00535) - 91100..92788 (-) 1689 Protein_81 histidine kinase -
  BS11774_RS00545 (BS11774_00540) - 92813..94060 (-) 1248 WP_031600262.1 IS256-like element ISBsu2 family transposase -
  BS11774_RS00555 (BS11774_00550) - 94157..94777 (-) 621 Protein_83 PDZ domain-containing protein -
  BS11774_RS00560 (BS11774_00555) comX 94789..94953 (-) 165 WP_015384519.1 competence pheromone ComX -
  BS11774_RS00565 (BS11774_00560) - 94966..95826 (-) 861 WP_128422373.1 polyprenyl synthetase family protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=264948 BS11774_RS00535 WP_003220716.1 90375..91019(-) (comA) [Bacillus subtilis strain ATCC 11774]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=264948 BS11774_RS00535 WP_003220716.1 90375..91019(-) (comA) [Bacillus subtilis strain ATCC 11774]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment