Detailed information NTG0026492

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SPYM_RS05500
• Genome accession: NC_009332
• Coordinates: 1077503..1079713 (-)
• Length: 736 a.a.
• NCBI ID: WP_011888957.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes str. Manfredo
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1072503..1084713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPYM_RS05470 (SpyM51074)	-	1072736..1073842 (-)	1107	WP_011184448.1	NAD(P)/FAD-dependent oxidoreductase	-
SPYM_RS05475 (SpyM51075)	-	1073882..1074670 (-)	789	WP_011888954.1	Nif3-like dinuclear metal center hexameric protein	-
SPYM_RS05480 (SpyM51076)	-	1074660..1075346 (-)	687	WP_011888955.1	tRNA (adenine(22)-N(1))-methyltransferase	-
SPYM_RS05485 (SpyM51077)	nth	1075418..1076074 (-)	657	WP_011888956.1	endonuclease III	-
SPYM_RS05490 (SpyM51078)	-	1076071..1076754 (-)	684	WP_002984890.1	DnaD domain-containing protein	-
SPYM_RS05495 (SpyM51079)	-	1076835..1077353 (-)	519	WP_002984891.1	adenine phosphoribosyltransferase	-
SPYM_RS05500 (SpyM51080)	recJ	1077503..1079713 (-)	2211	WP_011888957.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SPYM_RS05505 (SpyM51081)	-	1079710..1080474 (-)	765	WP_011888958.1	SDR family NAD(P)-dependent oxidoreductase	-
SPYM_RS05510 (SpyM51082)	rnz	1080474..1081403 (-)	930	WP_009881223.1	ribonuclease Z	-
SPYM_RS05515 (SpyM51083)	-	1081418..1082053 (-)	636	WP_011888959.1	cystathionine beta-lyase	-
SPYM_RS05520 (SpyM51084)	hflX	1082046..1083284 (-)	1239	WP_011888960.1	GTPase HflX	-
SPYM_RS05525 (SpyM51085)	miaA	1083357..1084256 (-)	900	WP_002990117.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SPYM_RS09480 (SpyM51086)	-	1084390..1084566 (+)	177	WP_002984898.1	DUF3042 family protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82519.35 Da
• Isoelectric Point: 4.7862

>NTDB_id=26492 SPYM_RS05500 WP_011888957.1 1077503..1079713(-) (recJ) [Streptococcus pyogenes str. Manfredo]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDSLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=26492 SPYM_RS05500 WP_011888957.1 1077503..1079713(-) (recJ) [Streptococcus pyogenes str. Manfredo]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTATCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAAGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTAGGAATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTCTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTTCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGACATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (317-434)

• RecJ OB domain (RecJ_OB) (450-556)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.144	100	0.633
recJ	Bacillus subtilis subsp. subtilis str. 168	34.866	100	0.371