Detailed information
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | C0W57_RS19970 | Genome accession | NZ_CP025939 |
| Coordinates | 3887484..3887921 (-) | Length | 145 a.a. |
| NCBI ID | WP_003156588.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain 10075 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3882484..3892921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0W57_RS19945 (C0W57_19945) | - | 3883504..3884640 (+) | 1137 | WP_007609290.1 | zinc-dependent alcohol dehydrogenase | - |
| C0W57_RS19950 (C0W57_19950) | - | 3884655..3885089 (+) | 435 | WP_014416871.1 | RDD family protein | - |
| C0W57_RS19955 (C0W57_19955) | - | 3885206..3885484 (+) | 279 | WP_263612330.1 | YckD family protein | - |
| C0W57_RS19960 (C0W57_19960) | - | 3885588..3887024 (+) | 1437 | WP_014416872.1 | glycoside hydrolase family 1 protein | - |
| C0W57_RS19965 (C0W57_19965) | nin/comJ | 3887065..3887463 (-) | 399 | WP_029973909.1 | competence protein ComJ | Regulator |
| C0W57_RS19970 (C0W57_19970) | nucA/comI | 3887484..3887921 (-) | 438 | WP_003156588.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| C0W57_RS19975 (C0W57_19975) | hxlB | 3888252..3888809 (-) | 558 | WP_021494205.1 | 6-phospho-3-hexuloisomerase | - |
| C0W57_RS19980 (C0W57_19980) | hxlA | 3888806..3889441 (-) | 636 | WP_014416875.1 | 3-hexulose-6-phosphate synthase | - |
| C0W57_RS19985 (C0W57_19985) | - | 3889673..3890035 (+) | 363 | WP_007409352.1 | winged helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 16072.35 Da Isoelectric Point: 8.4850
>NTDB_id=264662 C0W57_RS19970 WP_003156588.1 3887484..3887921(-) (nucA/comI) [Bacillus velezensis strain 10075]
MKTLKALLLVLIIIAGAVAALIKGDLFSDNEQTVQKSDYDKVILFPSDRYPETAKHIKDAIKEGHSSICTIDRDGVHKRR
EQSLKHVPVKTGYDRDEWPMAVCKQGGNNASVEYISPADNRGAGSWVGHQLTNDPDGTRVLFKIK
MKTLKALLLVLIIIAGAVAALIKGDLFSDNEQTVQKSDYDKVILFPSDRYPETAKHIKDAIKEGHSSICTIDRDGVHKRR
EQSLKHVPVKTGYDRDEWPMAVCKQGGNNASVEYISPADNRGAGSWVGHQLTNDPDGTRVLFKIK
Nucleotide
Download Length: 438 bp
>NTDB_id=264662 C0W57_RS19970 WP_003156588.1 3887484..3887921(-) (nucA/comI) [Bacillus velezensis strain 10075]
TTGAAAACATTAAAAGCACTGCTGCTTGTTCTTATCATCATTGCCGGAGCAGTCGCGGCCCTGATCAAGGGTGATCTTTT
CTCAGATAACGAGCAGACCGTTCAGAAGAGTGATTACGACAAGGTAATCCTATTTCCGTCCGATCGATATCCGGAAACAG
CAAAGCATATTAAGGACGCGATAAAAGAAGGACATTCCAGCATATGCACCATTGACAGAGACGGAGTACATAAGCGGCGT
GAGCAATCTCTTAAACATGTGCCTGTCAAAACGGGATACGATAGGGATGAATGGCCGATGGCGGTTTGTAAACAGGGCGG
AAACAACGCCTCCGTAGAATATATTTCTCCGGCAGACAACCGCGGAGCCGGCTCTTGGGTCGGACACCAGCTTACCAATG
ATCCCGACGGAACGAGAGTATTATTTAAAATCAAGTAA
TTGAAAACATTAAAAGCACTGCTGCTTGTTCTTATCATCATTGCCGGAGCAGTCGCGGCCCTGATCAAGGGTGATCTTTT
CTCAGATAACGAGCAGACCGTTCAGAAGAGTGATTACGACAAGGTAATCCTATTTCCGTCCGATCGATATCCGGAAACAG
CAAAGCATATTAAGGACGCGATAAAAGAAGGACATTCCAGCATATGCACCATTGACAGAGACGGAGTACATAAGCGGCGT
GAGCAATCTCTTAAACATGTGCCTGTCAAAACGGGATACGATAGGGATGAATGGCCGATGGCGGTTTGTAAACAGGGCGG
AAACAACGCCTCCGTAGAATATATTTCTCCGGCAGACAACCGCGGAGCCGGCTCTTGGGTCGGACACCAGCTTACCAATG
ATCCCGACGGAACGAGAGTATTATTTAAAATCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
73.81 |
86.897 |
0.641 |