Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   DV166_RS02795 Genome accession   NZ_CP031334
Coordinates   485812..486318 (+) Length   168 a.a.
NCBI ID   WP_002219900.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22293     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 480812..491318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV166_RS02760 - 480823..482358 (+) 1536 WP_002221654.1 sodium-dependent transporter -
  DV166_RS02765 - 482355..482447 (+) 93 WP_002233157.1 methionine/alanine import family NSS transporter small subunit -
  DV166_RS02770 lysA 482507..483727 (-) 1221 WP_021437569.1 diaminopimelate decarboxylase -
  DV166_RS02775 - 483738..483908 (-) 171 WP_002219896.1 lipoprotein -
  DV166_RS02780 cyaY 483979..484302 (+) 324 WP_002219897.1 iron donor protein CyaY -
  DV166_RS02785 - 484329..485345 (+) 1017 WP_002219898.1 YeiH family protein -
  DV166_RS02790 - 485371..485790 (+) 420 WP_002219899.1 DUF2251 domain-containing protein -
  DV166_RS02795 luxS 485812..486318 (+) 507 WP_002219900.1 S-ribosylhomocysteine lyase Regulator
  DV166_RS02800 polA 486463..489255 (+) 2793 WP_115436938.1 DNA polymerase I -
  DV166_RS02810 - 490189..490890 (-) 702 Protein_443 IS5 family transposase -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18669.39 Da        Isoelectric Point: 5.5451

>NTDB_id=264662 DV166_RS02795 WP_002219900.1 485812..486318(+) (luxS) [Neisseria meningitidis strain M22293]
MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPNKEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
LDEGLLNA

Nucleotide


Download         Length: 507 bp        

>NTDB_id=264662 DV166_RS02795 WP_002219900.1 485812..486318(+) (luxS) [Neisseria meningitidis strain M22293]
ATGCCCCTACTAGACAGTTTCAAAGTCGATCACACCCGTATGCACGCCCCCGCCGTACGCGTGGCGAAAACCATGACCAC
GCCCAAAGGCGACACCATTACCGTATTCGACCTGCGTTTCTGCGTGCCCAACAAAGAAATCCTGCCCGAAAAAGGCATCC
ACACGCTGGAGCATTTGTTCGCCGGTTTTATGCGCGACCACTTGAACGGCAACGGCGTGGAAATTATCGACATTTCCCCG
ATGGGCTGCCGCACCGGTTTCTACATGAGCCTTATCGGCACGCCTTCCGAACAGCAGGTCGCCGATGCATGGCTCGCCTC
GATGCAGGATGTGGGCAATGTCAAAGACCAAAGCAAAATCCCCGAGTTGAACGAATACCAATGCGGCACTTATCAAATGC
ACTCGCTCGCCGAAGCGCAGCAAATCGCGCAAAACGTGTTGGCGCGCAAAGTGGCGGTGAACAAAAACGAAGAGCTGACG
CTGGATGAAGGGCTGCTGAACGCCTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

76.647

99.405

0.762

Multiple sequence alignment