Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C0W57_RS18450 | Genome accession | NZ_CP025939 |
| Coordinates | 3603871..3604161 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain 10075 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3598871..3609161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0W57_RS18410 (C0W57_18410) | darA | 3598889..3599218 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| C0W57_RS18415 (C0W57_18415) | - | 3599231..3599671 (+) | 441 | WP_029974647.1 | YaaR family protein | - |
| C0W57_RS18420 (C0W57_18420) | holB | 3599683..3600672 (+) | 990 | WP_029974650.1 | DNA polymerase III subunit delta' | - |
| C0W57_RS18425 (C0W57_18425) | ricT | 3600675..3601502 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| C0W57_RS18430 (C0W57_18430) | yabA | 3601517..3601876 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| C0W57_RS18435 (C0W57_18435) | - | 3601937..3602680 (+) | 744 | WP_029974652.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C0W57_RS18440 (C0W57_18440) | - | 3602667..3602966 (+) | 300 | WP_029974654.1 | GIY-YIG nuclease family protein | - |
| C0W57_RS18445 (C0W57_18445) | rsmI | 3602941..3603822 (+) | 882 | WP_029974655.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C0W57_RS18450 (C0W57_18450) | abrB | 3603871..3604161 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C0W57_RS18455 (C0W57_18455) | metG | 3604644..3606635 (+) | 1992 | WP_029974660.1 | methionine--tRNA ligase | - |
| C0W57_RS18460 (C0W57_18460) | - | 3606712..3607479 (+) | 768 | WP_021494159.1 | TatD family hydrolase | - |
| C0W57_RS18465 (C0W57_18465) | - | 3607614..3608939 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=264657 C0W57_RS18450 WP_169510469.1 3603871..3604161(-) (abrB) [Bacillus velezensis strain 10075]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=264657 C0W57_RS18450 WP_169510469.1 3603871..3604161(-) (abrB) [Bacillus velezensis strain 10075]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |