Detailed information NTG0264647

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: C0W57_RS15420
• Genome accession: NZ_CP025939
• Coordinates: 3012093..3013256 (-)
• Length: 387 a.a.
• NCBI ID: WP_103042075.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 10075
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3007093..3018256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0W57_RS15390 (C0W57_15390)	-	3007358..3007777 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
C0W57_RS15395 (C0W57_15395)	comFC	3007851..3008540 (-)	690	WP_199449054.1	ComF family protein	Machinery gene
C0W57_RS15400 (C0W57_15400)	-	3008546..3008830 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
C0W57_RS15405 (C0W57_15405)	comFA	3008888..3010273 (-)	1386	WP_029972824.1	DEAD/DEAH box helicase	Machinery gene
C0W57_RS15410 (C0W57_15410)	-	3010381..3011229 (-)	849	WP_003151387.1	DegV family protein	-
C0W57_RS15415 (C0W57_15415)	degU	3011327..3012016 (-)	690	WP_103042074.1	two-component system response regulator DegU	Regulator
C0W57_RS15420 (C0W57_15420)	degS	3012093..3013256 (-)	1164	WP_103042075.1	two-component sensor histidine kinase DegS	Regulator
C0W57_RS15425 (C0W57_15425)	-	3013479..3014126 (+)	648	WP_007614107.1	YigZ family protein	-
C0W57_RS15430 (C0W57_15430)	-	3014131..3015345 (+)	1215	WP_014419013.1	LCP family protein	-
C0W57_RS15435 (C0W57_15435)	-	3015444..3016520 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
C0W57_RS15440 (C0W57_15440)	tuaH	3016653..3017849 (-)	1197	WP_029972825.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 44998.74 Da
• Isoelectric Point: 6.8616

>NTDB_id=264647 C0W57_RS15420 WP_103042075.1 3012093..3013256(-) (degS) [Bacillus velezensis strain 10075]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDPRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=264647 C0W57_RS15420 WP_103042075.1 3012093..3013256(-) (degS) [Bacillus velezensis strain 10075]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCGTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCCTCGCCAAGTGGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948