Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C0W57_RS11430 Genome accession   NZ_CP025939
Coordinates   2241870..2242061 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain 10075     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2236870..2247061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0W57_RS11405 (C0W57_11405) - 2237228..2238214 (-) 987 WP_025284553.1 ABC transporter ATP-binding protein -
  C0W57_RS11410 (C0W57_11410) - 2238388..2239173 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  C0W57_RS11415 (C0W57_11415) fabF 2239257..2240495 (-) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  C0W57_RS11420 (C0W57_11420) - 2240518..2241456 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  C0W57_RS11425 (C0W57_11425) - 2241623..2241841 (+) 219 WP_007409123.1 hypothetical protein -
  C0W57_RS11430 (C0W57_11430) comZ 2241870..2242061 (-) 192 WP_003155061.1 ComZ family protein Regulator
  C0W57_RS11435 (C0W57_11435) med 2242074..2243027 (-) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  C0W57_RS11440 (C0W57_11440) - 2243118..2243684 (-) 567 WP_017417444.1 hypothetical protein -
  C0W57_RS11445 (C0W57_11445) - 2243767..2244501 (-) 735 WP_022553564.1 hypothetical protein -
  C0W57_RS11455 (C0W57_11455) - 2244762..2244947 (+) 186 WP_007409129.1 YjzD family protein -
  C0W57_RS11460 (C0W57_11460) - 2244984..2245163 (-) 180 WP_003155070.1 YjzC family protein -
  C0W57_RS11465 (C0W57_11465) argF 2245239..2246210 (-) 972 WP_029973149.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=264630 C0W57_RS11430 WP_003155061.1 2241870..2242061(-) (comZ) [Bacillus velezensis strain 10075]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=264630 C0W57_RS11430 WP_003155061.1 2241870..2242061(-) (comZ) [Bacillus velezensis strain 10075]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment