Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C0W57_RS10015 Genome accession   NZ_CP025939
Coordinates   1982316..1982780 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 10075     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1977316..1987780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0W57_RS09990 (C0W57_09990) - 1977823..1978371 (-) 549 WP_029973676.1 hypothetical protein -
  C0W57_RS09995 (C0W57_09995) fadH 1978485..1979249 (-) 765 WP_029973675.1 2,4-dienoyl-CoA reductase -
  C0W57_RS10000 (C0W57_10000) - 1979393..1980256 (+) 864 WP_021493757.1 metallophosphoesterase -
  C0W57_RS10005 (C0W57_10005) - 1980331..1980825 (+) 495 WP_089072484.1 L,D-transpeptidase family protein -
  C0W57_RS10010 (C0W57_10010) - 1980901..1982193 (+) 1293 WP_029973674.1 MFS transporter -
  C0W57_RS10015 (C0W57_10015) kre 1982316..1982780 (+) 465 WP_003154622.1 YkyB family protein Regulator
  C0W57_RS10020 (C0W57_10020) cheV 1982823..1983735 (-) 913 Protein_1958 chemotaxis protein CheV -
  C0W57_RS22535 - 1983924..1984085 (+) 162 WP_099721949.1 hypothetical protein -
  C0W57_RS10030 (C0W57_10030) - 1984286..1985499 (+) 1214 Protein_1960 aminotransferase A -
  C0W57_RS10035 (C0W57_10035) - 1985480..1987300 (-) 1821 WP_021493759.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=264623 C0W57_RS10015 WP_003154622.1 1982316..1982780(+) (kre) [Bacillus velezensis strain 10075]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=264623 C0W57_RS10015 WP_003154622.1 1982316..1982780(+) (kre) [Bacillus velezensis strain 10075]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment