Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C0W57_RS09915 Genome accession   NZ_CP025939
Coordinates   1966321..1966917 (-) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain 10075     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1961321..1971917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0W57_RS09890 (C0W57_09890) mobB 1961697..1962218 (-) 522 WP_029973679.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  C0W57_RS09895 (C0W57_09895) glp 1962179..1963471 (-) 1293 WP_022553413.1 gephyrin-like molybdotransferase Glp -
  C0W57_RS09900 (C0W57_09900) - 1963489..1964508 (-) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  C0W57_RS09905 (C0W57_09905) - 1964560..1965162 (-) 603 WP_014417620.1 molybdenum cofactor guanylyltransferase -
  C0W57_RS09910 (C0W57_09910) - 1965308..1966300 (+) 993 WP_021493753.1 hypothetical protein -
  C0W57_RS09915 (C0W57_09915) rok 1966321..1966917 (-) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  C0W57_RS09920 (C0W57_09920) - 1967369..1967827 (-) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  C0W57_RS09925 (C0W57_09925) - 1968115..1968921 (+) 807 WP_021493755.1 mechanosensitive ion channel family protein -
  C0W57_RS09930 (C0W57_09930) - 1968955..1969200 (-) 246 WP_003154596.1 YkuS family protein -
  C0W57_RS09935 (C0W57_09935) - 1969261..1970385 (-) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  C0W57_RS09940 (C0W57_09940) dapD 1970456..1971166 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C0W57_RS09945 (C0W57_09945) - 1971248..1971703 (-) 456 WP_007409622.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=264622 C0W57_RS09915 WP_003154591.1 1966321..1966917(-) (rok) [Bacillus velezensis strain 10075]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=264622 C0W57_RS09915 WP_003154591.1 1966321..1966917(-) (rok) [Bacillus velezensis strain 10075]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTAAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment