Detailed information NTG0264581

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: C1H56_RS17985
• Genome accession: NZ_CP025937
• Coordinates: 680572..681666 (-)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae strain A1552
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 675572..686666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1H56_RS17960 (C1H56_17980)	-	675912..676310 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
C1H56_RS17970 (C1H56_17990)	-	676562..677080 (+)	519	WP_000914961.1	hypothetical protein	-
C1H56_RS17975 (C1H56_17995)	-	677324..677989 (+)	666	WP_000268204.1	flagellar brake protein	-
C1H56_RS17980 (C1H56_18000)	luxQ	677981..680554 (-)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
C1H56_RS17985 (C1H56_18005)	luxP	680572..681666 (-)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
C1H56_RS17990 (C1H56_18010)	traF	681878..683038 (-)	1161	WP_001025860.1	conjugal transfer protein TraF	-
C1H56_RS17995 (C1H56_18015)	-	683140..683445 (-)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
C1H56_RS18000 (C1H56_18020)	-	683462..684112 (-)	651	WP_001025631.1	YceH family protein	-
C1H56_RS18005 (C1H56_18025)	-	684154..684351 (-)	198	WP_001246071.1	hypothetical protein	-
C1H56_RS18010 (C1H56_18030)	-	684539..684859 (+)	321	WP_001089529.1	DUF496 family protein	-
C1H56_RS18020 (C1H56_18040)	-	685272..685523 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=264581 C1H56_RS17985 WP_000823678.1 680572..681666(-) (luxP) [Vibrio cholerae strain A1552]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=264581 C1H56_RS17985 WP_000823678.1 680572..681666(-) (luxP) [Vibrio cholerae strain A1552]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1