Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | DV179_RS05770 | Genome accession | NZ_CP031331 |
| Coordinates | 962830..965409 (+) | Length | 859 a.a. |
| NCBI ID | WP_002220613.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain M26263 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 957830..970409
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV179_RS05735 | - | 957963..958694 (+) | 732 | WP_002220620.1 | surface lipoprotein assembly modifier | - |
| DV179_RS05740 | ppx | 958811..960319 (+) | 1509 | WP_002220619.1 | exopolyphosphatase | - |
| DV179_RS05750 | - | 960528..960893 (-) | 366 | WP_002220617.1 | hypothetical protein | - |
| DV179_RS05760 | - | 961213..961554 (-) | 342 | WP_002220616.1 | hypothetical protein | - |
| DV179_RS05765 | trpS | 961560..962570 (-) | 1011 | WP_002224583.1 | tryptophan--tRNA ligase | - |
| DV179_RS05770 | clpC | 962830..965409 (+) | 2580 | WP_002220613.1 | ATP-dependent chaperone ClpB | Regulator |
| DV179_RS05775 | - | 965496..966710 (-) | 1215 | WP_002220612.1 | pyridoxal phosphate-dependent aminotransferase | - |
| DV179_RS05780 | - | 966799..967008 (-) | 210 | WP_002212949.1 | 4-oxalocrotonate tautomerase family protein | - |
| DV179_RS05785 | - | 967353..968159 (+) | 807 | WP_002212946.1 | DUF4198 domain-containing protein | - |
| DV179_RS05790 | - | 968217..969482 (-) | 1266 | WP_002221776.1 | Glu/Leu/Phe/Val dehydrogenase | - |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95179.57 Da Isoelectric Point: 5.3090
>NTDB_id=264541 DV179_RS05770 WP_002220613.1 962830..965409(+) (clpC) [Neisseria meningitidis strain M26263]
MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHSGVNVPQVKQRLQQHLNSLPKVSGQGGD
ILPSRELQAVLNLMDKAATKRGDAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVENTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
VKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQID
EVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGER
DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE
YMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVM
TSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD
AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA
MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHSGVNVPQVKQRLQQHLNSLPKVSGQGGD
ILPSRELQAVLNLMDKAATKRGDAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVENTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
VKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQID
EVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGER
DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE
YMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVM
TSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTVSD
AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA
Nucleotide
Download Length: 2580 bp
>NTDB_id=264541 DV179_RS05770 WP_002220613.1 962830..965409(+) (clpC) [Neisseria meningitidis strain M26263]
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGCTGCGGACGGCAG
CTATCTGGAAGCAGGCTTTGTGTTAAAAGCCCTGCTTGACGACCAAAACAGCGGAGCCGCCGCGTTGCTGGCGCATTCGG
GCGTGAACGTGCCGCAGGTGAAACAGCGTTTGCAGCAGCATTTGAACAGCCTGCCGAAAGTGTCCGGCCAGGGCGGCGAC
ATTCTGCCCAGCCGCGAATTGCAGGCGGTGTTGAACCTGATGGACAAAGCCGCAACCAAACGCGGCGATGCCTATATCGC
CAGTGAACTTTTCCTGCTTGCCTTGGTGCAGCAGAACGATGCGGCCGGCAAAATTTTGAAAGAAGCCGGCGCGACCGAAC
AAAACATCAATGCCGCAATCGATGCGGTACGAGGAGGACAAAACGTGAACGATGCCAATGCCGAAGACCAACGCGATGCG
CTGAAAAAATATACGCTTGACCTGACCCAGCGCGCCCGCGACGGCAAACTTGACCCCGTTATCGGCCGTGACGACGAAAT
CCGCCGCGCGATTCAAGTGCTGCAACGCCGCACCAAAAACAACCCCGTGCTGATTGGCGAACCGGGCGTGGGTAAAACTG
CCATTGTTGAAGGCTTGGCGCAACGTATCGTCAACGGCGAAGTGCCTGAATCCCTGCGTAACAAACGCCTTTTGGTTCTG
GACTTGGCGGCTTTGATTGCCGGCGCGAAATACCGCGGCGAATTTGAAGAACGCTTGAAAGGCGTGTTGAACGATTTGGC
GAAAGACGACGGCAACACTCTGATTTTCATCGACGAAATCCATACTTTGGTCGGCGCAGGCAAAACCGACGGTGCGATGG
ATGCGGGCAATATGCTGAAACCGGCTTTGGCACGTGGCGAATTGCACTGTATCGGCGCGACCACTTTGGACGAATACCGC
CAATACATCGAAAAAGATGCGGCACTCGAACGCCGCTTCCAAAAAGTATTGGTCGGCGAGCCAAGCGTGGAAAACACCAT
CGCTATTTTGCGCGGTTTACAGGAGCGTTATGAAATCCACCATGGTATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATCACCGACCGCTTCCTGCCCGATAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGT
GTCAAGATGGAAAAAGAAACCAAGCCGGAAGCAATGGACAAAATCGACCGCCGTCTAATTCAGCTTCGGATGGAAAAGGC
GCACGTTGAAAAAGAAAAAGACGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAGGAAATCAACGGTCTGCAAAAAG
AATACGCCGATTTAGACGAAATCTGGAAAGCCGAAAAAGCAATTTCAGACGGTGCTGCTAATATTAAGAAACAAATTGAC
GAAGTCAAAATTAAAATCGAACAGGCAAAACGGCAAGGCGATTTGGCACTGGCTTCAAAATTGATGTATGAAGATTTGGA
GCATTTGGAAAAACAGCGTGCAGCCGCCGAACGGGCAGATACGGACAGCACAAAACCGGCAAACAAACTCTTGCGTAATA
ATGTCGGCGCAGAGGAAATCGCAGAAGTTGTTTCCCGTATGACCGGCATTCCTGTGTCAAAAATGATGGAAGGCGAACGT
GACAAGTTGCTGAAAATGGAAGAAGTGTTGCACCGCCGCGTAGTCGGTCAAGACGAAGCCGTGCGTGCCGTGTCCGACGC
TATCCGCCGCAGCCGTTCCGGTCTTGCCGACCCGAATAAACCCTACGGCAGCTTCCTGTTCTTGGGCCCGACCGGCGTGG
GTAAGACCGAATTGTGCAAGGCATTGGCAGGCTTCCTGTTCGACAGCGAAGATCATCTGATTCGTATCGATATGTCCGAA
TACATGGAAAAACATGCTGTTGCCCGCCTAATTGGTGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGAC
TGAGCAAGTCCGCCGCAAACCATACAGCGTGATTCTTTTGGATGAAGTGGAAAAAGCCCATCCGGACGTGTTCAACATCC
TGCTGCAAGTATTGGATGACGGTCGTTTGACCGACGGGCAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATG
ACTTCCAACATCGGCAGCCAGCACATCCAACAAATGGGCATTCAGGATTACGAAGCGGTAAAAGAAGTTGTGATGGAGGA
TGTGAAAGAACATTTCCGTCCTGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCACGGACTGGATCAGGATAATA
TCCGCAACATTGCGAAAATCCAGCTCAAAGGCTTGGAAAAACGTTTGGAAAAACAAAACCTCCGCCTGACTGTTTCCGAT
GCCGCTCTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCCATCCAGTCGGA
AATCGAAAACCCGCTGGCAAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAGGGTAGAAGCCGACGGCG
ACAGACTGAAATTTGCCTGA
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGCTGCGGACGGCAG
CTATCTGGAAGCAGGCTTTGTGTTAAAAGCCCTGCTTGACGACCAAAACAGCGGAGCCGCCGCGTTGCTGGCGCATTCGG
GCGTGAACGTGCCGCAGGTGAAACAGCGTTTGCAGCAGCATTTGAACAGCCTGCCGAAAGTGTCCGGCCAGGGCGGCGAC
ATTCTGCCCAGCCGCGAATTGCAGGCGGTGTTGAACCTGATGGACAAAGCCGCAACCAAACGCGGCGATGCCTATATCGC
CAGTGAACTTTTCCTGCTTGCCTTGGTGCAGCAGAACGATGCGGCCGGCAAAATTTTGAAAGAAGCCGGCGCGACCGAAC
AAAACATCAATGCCGCAATCGATGCGGTACGAGGAGGACAAAACGTGAACGATGCCAATGCCGAAGACCAACGCGATGCG
CTGAAAAAATATACGCTTGACCTGACCCAGCGCGCCCGCGACGGCAAACTTGACCCCGTTATCGGCCGTGACGACGAAAT
CCGCCGCGCGATTCAAGTGCTGCAACGCCGCACCAAAAACAACCCCGTGCTGATTGGCGAACCGGGCGTGGGTAAAACTG
CCATTGTTGAAGGCTTGGCGCAACGTATCGTCAACGGCGAAGTGCCTGAATCCCTGCGTAACAAACGCCTTTTGGTTCTG
GACTTGGCGGCTTTGATTGCCGGCGCGAAATACCGCGGCGAATTTGAAGAACGCTTGAAAGGCGTGTTGAACGATTTGGC
GAAAGACGACGGCAACACTCTGATTTTCATCGACGAAATCCATACTTTGGTCGGCGCAGGCAAAACCGACGGTGCGATGG
ATGCGGGCAATATGCTGAAACCGGCTTTGGCACGTGGCGAATTGCACTGTATCGGCGCGACCACTTTGGACGAATACCGC
CAATACATCGAAAAAGATGCGGCACTCGAACGCCGCTTCCAAAAAGTATTGGTCGGCGAGCCAAGCGTGGAAAACACCAT
CGCTATTTTGCGCGGTTTACAGGAGCGTTATGAAATCCACCATGGTATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATCACCGACCGCTTCCTGCCCGATAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGT
GTCAAGATGGAAAAAGAAACCAAGCCGGAAGCAATGGACAAAATCGACCGCCGTCTAATTCAGCTTCGGATGGAAAAGGC
GCACGTTGAAAAAGAAAAAGACGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAGGAAATCAACGGTCTGCAAAAAG
AATACGCCGATTTAGACGAAATCTGGAAAGCCGAAAAAGCAATTTCAGACGGTGCTGCTAATATTAAGAAACAAATTGAC
GAAGTCAAAATTAAAATCGAACAGGCAAAACGGCAAGGCGATTTGGCACTGGCTTCAAAATTGATGTATGAAGATTTGGA
GCATTTGGAAAAACAGCGTGCAGCCGCCGAACGGGCAGATACGGACAGCACAAAACCGGCAAACAAACTCTTGCGTAATA
ATGTCGGCGCAGAGGAAATCGCAGAAGTTGTTTCCCGTATGACCGGCATTCCTGTGTCAAAAATGATGGAAGGCGAACGT
GACAAGTTGCTGAAAATGGAAGAAGTGTTGCACCGCCGCGTAGTCGGTCAAGACGAAGCCGTGCGTGCCGTGTCCGACGC
TATCCGCCGCAGCCGTTCCGGTCTTGCCGACCCGAATAAACCCTACGGCAGCTTCCTGTTCTTGGGCCCGACCGGCGTGG
GTAAGACCGAATTGTGCAAGGCATTGGCAGGCTTCCTGTTCGACAGCGAAGATCATCTGATTCGTATCGATATGTCCGAA
TACATGGAAAAACATGCTGTTGCCCGCCTAATTGGTGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGAC
TGAGCAAGTCCGCCGCAAACCATACAGCGTGATTCTTTTGGATGAAGTGGAAAAAGCCCATCCGGACGTGTTCAACATCC
TGCTGCAAGTATTGGATGACGGTCGTTTGACCGACGGGCAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATG
ACTTCCAACATCGGCAGCCAGCACATCCAACAAATGGGCATTCAGGATTACGAAGCGGTAAAAGAAGTTGTGATGGAGGA
TGTGAAAGAACATTTCCGTCCTGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCACGGACTGGATCAGGATAATA
TCCGCAACATTGCGAAAATCCAGCTCAAAGGCTTGGAAAAACGTTTGGAAAAACAAAACCTCCGCCTGACTGTTTCCGAT
GCCGCTCTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCCATCCAGTCGGA
AATCGAAAACCCGCTGGCAAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAGGGTAGAAGCCGACGGCG
ACAGACTGAAATTTGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.902 |
100 |
0.44 |
| clpC | Streptococcus pneumoniae Rx1 |
39.203 |
100 |
0.412 |
| clpC | Streptococcus pneumoniae TIGR4 |
39.203 |
100 |
0.412 |
| clpC | Streptococcus pneumoniae D39 |
39.203 |
100 |
0.412 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
38.573 |
100 |
0.403 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.118 |
80.792 |
0.381 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.353 |
79.162 |
0.375 |
| clpE | Streptococcus mutans UA159 |
45.322 |
79.627 |
0.361 |