Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   DV144_RS02610 Genome accession   NZ_CP031328
Coordinates   428750..430009 (+) Length   419 a.a.
NCBI ID   WP_002255618.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18755     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 423750..435009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV144_RS02590 rffG 423880..424962 (+) 1083 WP_002238588.1 dTDP-glucose 4,6-dehydratase -
  DV144_RS02595 rfbA 425025..425891 (+) 867 WP_002259283.1 glucose-1-phosphate thymidylyltransferase RfbA -
  DV144_RS02600 rfbC 425936..426475 (+) 540 WP_115430704.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  DV144_RS02605 - 426499..428613 (+) 2115 WP_101045703.1 capsular polysaccharide biosynthesis protein -
  DV144_RS02610 kpsS 428750..430009 (+) 1260 WP_002255618.1 capsule biosynthesis protein Regulator
  DV144_RS02615 - 430377..431783 (+) 1407 WP_096123359.1 tetratricopeptide repeat protein -
  DV144_RS02620 gltS 432001..433215 (+) 1215 WP_002224378.1 sodium/glutamate symporter -
  DV144_RS02625 - 433314..434330 (+) 1017 WP_002235351.1 lysozyme inhibitor LprI family protein -
  DV144_RS02630 - 434341..434538 (+) 198 WP_002225930.1 hypothetical protein -
  DV144_RS13695 - 434556..434705 (+) 150 WP_033908521.1 hypothetical protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 48707.66 Da        Isoelectric Point: 9.0892

>NTDB_id=264310 DV144_RS02610 WP_002255618.1 428750..430009(+) (kpsS) [Neisseria meningitidis strain M18755]
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAHYDIPGMTDQNTLAEFWNHPTPPEKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSNSSTPVI

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=264310 DV144_RS02610 WP_002255618.1 428750..430009(+) (kpsS) [Neisseria meningitidis strain M18755]
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGCAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAGTTTTTGCAA
GAATACATCACTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTACAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGTGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAACACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCTATGGACCGCGGCTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGTGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGGCTGATTCACAATAT
GCCTGTCAAAGTGCTCGGCCGTGCCCATTACGACATTCCCGGCATGACTGACCAAAACACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGAAAAAGAGCTGTTTCATGCCTACCGTATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTGTTTTTCCCCAACAAAAAAACCTCCAACTCTTCCACACCAGTAATCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

38.579

94.033

0.363


Multiple sequence alignment