Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   DV144_RS00940 Genome accession   NZ_CP031328
Coordinates   148834..149340 (+) Length   168 a.a.
NCBI ID   WP_002219900.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18755     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 143834..154340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV144_RS00905 - 143845..145380 (+) 1536 WP_002223111.1 sodium-dependent transporter -
  DV144_RS00910 - 145377..145469 (+) 93 WP_002233157.1 methionine/alanine import family NSS transporter small subunit -
  DV144_RS00915 lysA 145505..146749 (-) 1245 WP_002239195.1 diaminopimelate decarboxylase -
  DV144_RS00920 - 146760..146930 (-) 171 WP_002225850.1 lipoprotein -
  DV144_RS00925 cyaY 147001..147324 (+) 324 WP_101127502.1 iron donor protein CyaY -
  DV144_RS00930 - 147351..148367 (+) 1017 WP_002219898.1 YeiH family protein -
  DV144_RS00935 - 148393..148812 (+) 420 WP_002219899.1 DUF2251 domain-containing protein -
  DV144_RS00940 luxS 148834..149340 (+) 507 WP_002219900.1 S-ribosylhomocysteine lyase Regulator
  DV144_RS00945 polA 149485..152274 (+) 2790 WP_002224132.1 DNA polymerase I -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18669.39 Da        Isoelectric Point: 5.5451

>NTDB_id=264303 DV144_RS00940 WP_002219900.1 148834..149340(+) (luxS) [Neisseria meningitidis strain M18755]
MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPNKEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
LDEGLLNA

Nucleotide


Download         Length: 507 bp        

>NTDB_id=264303 DV144_RS00940 WP_002219900.1 148834..149340(+) (luxS) [Neisseria meningitidis strain M18755]
ATGCCCCTACTAGACAGTTTCAAAGTCGATCACACCCGTATGCACGCCCCCGCCGTACGCGTGGCGAAAACCATGACCAC
GCCCAAAGGCGACACCATTACCGTATTCGACCTGCGTTTCTGCGTGCCCAACAAAGAAATCCTGCCCGAAAAAGGCATCC
ACACGCTGGAGCATTTGTTCGCCGGTTTTATGCGCGACCACTTGAACGGCAACGGCGTGGAAATTATCGACATTTCCCCG
ATGGGCTGCCGCACCGGTTTCTACATGAGCCTTATCGGCACGCCTTCCGAACAGCAGGTCGCCGATGCATGGCTCGCCTC
GATGCAGGATGTGGGCAATGTCAAAGACCAAAGCAAAATCCCCGAGTTGAACGAATACCAATGCGGCACTTATCAAATGC
ACTCGCTCGCCGAAGCGCAGCAAATCGCGCAAAACGTGTTGGCGCGCAAAGTGGCGGTGAACAAAAACGAAGAGCTGACG
CTGGATGAAGGGCTGCTGAACGCCTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

76.647

99.405

0.762