Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   DV155_RS07785 Genome accession   NZ_CP031326
Coordinates   1321846..1322352 (-) Length   168 a.a.
NCBI ID   WP_002218101.1    Uniprot ID   A1KW60
Organism   Neisseria meningitidis strain M21374     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1316846..1327352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV155_RS07780 polA 1318908..1321700 (-) 2793 WP_002224673.1 DNA polymerase I -
  DV155_RS07785 luxS 1321846..1322352 (-) 507 WP_002218101.1 S-ribosylhomocysteine lyase Regulator
  DV155_RS07790 - 1322374..1322793 (-) 420 WP_002218100.1 DUF2251 domain-containing protein -
  DV155_RS07795 cyaY 1322824..1323147 (-) 324 WP_002218099.1 iron donor protein CyaY -
  DV155_RS07800 - 1323218..1323388 (+) 171 WP_002218098.1 lipoprotein -
  DV155_RS07805 lysA 1323399..1324643 (+) 1245 WP_002221655.1 diaminopimelate decarboxylase -
  DV155_RS07810 - 1324679..1324771 (-) 93 WP_002233157.1 methionine/alanine import family NSS transporter small subunit -
  DV155_RS07815 - 1324768..1326303 (-) 1536 WP_002221654.1 sodium-dependent transporter -
  DV155_RS07820 - 1326516..1327169 (-) 654 WP_002224672.1 IS1595 family transposase -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18683.41 Da        Isoelectric Point: 5.5451

>NTDB_id=264271 DV155_RS07785 WP_002218101.1 1321846..1322352(-) (luxS) [Neisseria meningitidis strain M21374]
MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPNKEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
LDEGLLNA

Nucleotide


Download         Length: 507 bp        

>NTDB_id=264271 DV155_RS07785 WP_002218101.1 1321846..1322352(-) (luxS) [Neisseria meningitidis strain M21374]
ATGCCCCTACTAGACAGTTTCAAAGTCGATCACACCCGTATGCATGCCCCCGCCGTACGCGTGGCGAAAACCATGACCAC
GCCCAAAGGCGACACCATTACCGTGTTCGACCTGCGCTTTTGCATTCCCAACAAAGAAATCCTGCCTGAAAAAGGCATAC
ACACGCTGGAGCATTTGTTCGCAGGTTTTATGCGCGACCACTTGAACGGCAACGGCGTGGAAATCATCGACATTTCCCCG
ATGGGCTGCCGCACCGGTTTCTACATGAGCCTTATCGGCACGCCTTCCGAACAGCAGGTCGCCGATGCATGGCTCGCCTC
GATGCAGGATGTGGGCAATGTCAAAGACCAAAGCAAAATCCCCGAGTTGAACGAATACCAATGCGGCACTTATCAAATGC
ACTCGCTCGCCGAAGCGCAGCAAATCGCGCAAAACGTGTTGGCGCGCAAAGTGGCGGTGAACAAAAACGAAGAGCTGACG
CTGGATGAAGGGCTGCTGAACGCCTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1KW60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

76.647

99.405

0.762