Detailed information NTG0263875

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: C1S76_RS09570
• Genome accession: NZ_CP025796
• Coordinates: 1994580..1995587 (+)
• Length: 335 a.a.
• NCBI ID: WP_009707836.1
• Uniprot ID: A0AAP9GE11
• Organism: Vibrio owensii strain 051011B
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1989580..2000587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1S76_RS09540	rplD	1989624..1990226 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
C1S76_RS09545	rplC	1990244..1990873 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
C1S76_RS09550	rpsJ	1990888..1991199 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
C1S76_RS09555	rpmE	1991655..1991876 (-)	222	WP_005435070.1	50S ribosomal protein L31	-
C1S76_RS09565	priA	1992172..1994373 (+)	2202	WP_045415395.1	primosomal protein N'	-
C1S76_RS09570	cytR	1994580..1995587 (+)	1008	WP_009707836.1	DNA-binding transcriptional regulator CytR	Regulator
C1S76_RS09575	-	1995739..1996290 (+)	552	WP_020196517.1	SPOR domain-containing protein	-
C1S76_RS09580	hslV	1996581..1997132 (+)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
C1S76_RS09585	hslU	1997162..1998493 (+)	1332	WP_020196516.1	HslU--HslV peptidase ATPase subunit	-
C1S76_RS09590	-	1998670..1999587 (+)	918	WP_005435047.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
C1S76_RS09595	rraA	1999663..2000190 (+)	528	WP_045415399.1	ribonuclease E activity regulator RraA	-
C1S76_RS09600	zapB	2000294..2000536 (-)	243	WP_005435037.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36959.54 Da
• Isoelectric Point: 5.9796

>NTDB_id=263875 C1S76_RS09570 WP_009707836.1 1994580..1995587(+) (cytR) [Vibrio owensii strain 051011B]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGINKEEQYSVIADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=263875 C1S76_RS09570 WP_009707836.1 1994580..1995587(+) (cytR) [Vibrio owensii strain 051011B]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTGATGAATCCAGAAAA
AGTCTCTTCATCGACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAGACCATTGTCACTATCGTCCCAGATATTTGCGACCCGTACTTCTCTGAGATTATTCGCGGC
ATTGAAGACGCAGCAATGGAACATGGTTACCTTGTTCTACTTGGTGATAGCGGTCAGCAGAAAAAGCGTGAAAGCTCATT
TGTAAACTTAGTCTTCACCAAGCAAGCTGATGGCATGCTGCTTCTCGGAACCGACCTGCCTTTTGATGTCAGCAAGCCGG
AACAGAAAAACCTACCACCTATGGTGATGGCGTGTGAGTTCGCACCGGAACTTGAATTGCCAACGGTGCATATCGATAAC
CTTACTTCTGCGTTCGAGGCTGTAAATTACCTGACTCAACTTGGCCATAAGCGTATTGCTCAAATCTCCGGTCCTGACAC
TGCGGTACTTTGTCAGTTCCGCCAACAGGGTTACCAGCAAGCACTTCGTCGCGCAGGCATTAATAAAGAAGAACAATACA
GCGTAATCGCAGACTTTTCTTTTGAAGGCGGCGTGCAAGCAGTCCGTAAACTTCTTGAGTTACCGGAACCGCCAACCGCA
CTCTTCTGCCACTGTGACACCATGGCAATTGGTGCGATTCAAGAAGCGAAACGTTTAGGTTTACGTATTCCTCAAGATTT
ATCGATCGTGGGCTTTGATGACATTCAGTTCGCACAATACTGCGATCCACCGTTAACGACTATCTCCCAACCTCGTTATG
AGATTGGTCGTCAAGCGATGTTAATGATGCTTGAACTATTGAAAGGCCATGACGTTCATTCCGGCTCTCGCTTACTAGAG
ACTAAGTTGGTTGTTCGTGGCAGCGCAGCGCCACCGCCATTGCGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.361	99.104	0.896