Detailed information NTG0263856

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: C1S74_RS14175
• Genome accession: NZ_CP025794
• Coordinates: 2864800..2868186 (-)
• Length: 1128 a.a.
• NCBI ID: WP_045403820.1
• Uniprot ID: -
• Organism: Vibrio hyugaensis strain 090810a
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2859800..2873186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1S74_RS14160	-	2860114..2861139 (-)	1026	WP_039976207.1	ABC transporter permease	-
C1S74_RS14165	-	2861142..2862128 (-)	987	WP_038865841.1	ABC transporter permease	-
C1S74_RS14170	-	2862299..2863981 (-)	1683	WP_045403818.1	ABC transporter substrate-binding protein	-
C1S74_RS14175	chiS	2864800..2868186 (-)	3387	WP_045403820.1	response regulator	Regulator
C1S74_RS14185	rsmC	2868415..2869440 (-)	1026	WP_045403823.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
C1S74_RS14190	-	2869517..2870602 (-)	1086	WP_045403825.1	AI-2E family transporter	-
C1S74_RS14195	hemL	2870960..2872255 (-)	1296	WP_045403827.1	glutamate-1-semialdehyde 2,1-aminomutase	-
C1S74_RS14200	erpA	2872502..2872843 (+)	342	WP_005439421.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127273.02 Da
• Isoelectric Point: 5.4411

>NTDB_id=263856 C1S74_RS14175 WP_045403820.1 2864800..2868186(-) (chiS) [Vibrio hyugaensis strain 090810a]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIQGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGSYNDSALGRTFKRLSEDVNARRKVNEDYTPIVVSDFEVESGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQENIQNSLEIIDKALAGETEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIVLVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTQRKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRIEQVLYNLIGNAIKYTSEGKIVISANVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLATEEEIKATQTLAARGHFQIPEANLENTDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPDTLALIEQEKPELLLLDIMMPGMSGYQVCSELRNTYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSCYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVTGETKFAFAEQSGFWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLNSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=263856 C1S74_RS14175 WP_045403820.1 2864800..2868186(-) (chiS) [Vibrio hyugaensis strain 090810a]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGTATCAC
GCCTTTGACGATCACTGCGATTTTCTTCCTGCAGTCACACAGTAAAGATCTTCAAGAACAAAGTACCTCACACCTACTTT
CTGTGCGTGACACGAAGCAACAACAGATCATCGACTACTTTGCGGCTCAAGAAACTGAAGTCATGGGCTTTGTTCGCTCA
GAATTGGCGTATGCCAGTGGTGGTCGATTCTATGGTTTAGTCAATGCATTCAGTCGCCTAGGGCATGATATTGACGAAGC
GAGAGAAAACGCACAGCAACGTTATATCCAAGGCAGTGGCGACCAGATAAAAACCTCAATTTTGCCAGAGTCTTCTAACT
ATGTTGGTAGTGAGCGTTATCGTCTATTACATAAACGCTACCACTGGGCGTACCTAGAACTGTTAAAGCGCTCTGACTTC
AACGACATCTTGTTGGTCGACATTGACGGTAACGTGACTTACTCGATCAATAAAGATGACAATTACGGCACAAACTTACT
GACAGGCAGCTATAACGACAGCGCCTTGGGCCGAACATTCAAACGTCTATCGGAGGACGTTAATGCGCGTCGTAAGGTCA
ATGAAGATTACACGCCTATCGTGGTCTCTGACTTTGAGGTAGAAAGTGGTAAGCAAGTTGCTTGGCTAGGTGCGCCCATT
GTTCAGCAGGGTTACCTGCATAGCTATGCAATGTTCCGCCTGCCGAACAATGGTATTACCAAACTTATTGCGGAAATTAA
TCGTGATTCCTCTATTGAAACCTTGTTAGTTGGTAGTGATCATAAACCTCGCACGATTAACACCAAGCAGGAAAACATCC
AAAACAGCTTGGAAATTATCGATAAAGCACTGGCGGGCGAAACCGAAGTAGGCACTTACAGCAACCGCTTAGGTGAAGAG
ATGATCGCGGCGTTTGCACCCATTGAAACTCGTGGCCTAACTTGGGCGCTAGTCGTGCAACTTCCTGAAAAAGAAGCGTT
TGCTCGTGTCCATCAGCTTGAGAAACTGTTTGTGATTGCGATGTTGATTGCGATCGTATTAGTCGTTATCGCTTCACATT
ACTTATCTAATTTCATCACTTCGCCGCTACTCAAGCTTACTTGGGCAGCAGAGAAAGTGTCTGCTGGTGACTTAGATGAA
ACGACCTTTAATACTCAGCGAAAAGATGAGATCGGGCGTCTTGCGATCAGCTTTGAGCGTATGCAGCGCTCAATTCGTGA
AAAGATTCAAACGATTAAACAACAAAACGAAGAGCTTGAGAGCAACATTAAGTTGATTCAAAAGCAAAACGAGGAGTTGC
AATTAGCAGACAAACTCAAAGATGAATTCCTAGCGACTACGTCTCACGAATTGCGGACACCGCTACACGGCATGGTGGGG
ATTGCAGAGACGTTAGTATCTGGCGCAAACGGTGCGATTCCAGCGAGTCAAAAATACCAGCTAGACATTATTATTAAGAG
TGGTCAGCGCTTGGCAAATCTCGTTGATGATTTATTGGATTATCATAAGATGCGCTATGGCAGCATGGATATCCAAAAAT
CAGCGGTAAGCTTAGCAAGTGCAACACGTTTGGTACTGGAACTCTCTGGCCACCTATTAGGTAACAAAACAATCCGCATC
ATTAACCAAGTCCCGGCGGATTTAAAAGCGGTCTCTGCCGATCCACAACGTATAGAGCAAGTGCTTTACAACTTGATTGG
TAACGCAATTAAGTACACCTCAGAAGGTAAAATTGTCATCTCGGCCAATGTGGTGGACGATCAGGTGCGCGTCCAAGTCG
TTGATACTGGCCAAGGTATCCCAGCGGAACATTTGGAGCACATCTTTGAACCGCTCATTCAGGCGGGCCAAGATGCAAGT
CGTTACCGTCAAGGTGCAGGACTCGGCCTATCCATTAGCCGTCAGCTTATCGAGTTGATGGGCGGCTCACTGTATGTAAG
TAGTCAACCAATGGTAGGAACAACCTTTAGCTTCACTTTACCTCTTGCAACAGAAGAGGAAATTAAAGCAACACAAACTC
TGGCGGCTCGTGGTCACTTCCAAATCCCTGAAGCAAATTTAGAAAACACCGACGATTTATCTCTGCCAGAAAACCCGGAT
GGCCCACTACTCTACGTCGCAGATGATGAACCGGTAAACTTACGCGTTTTAGAGAGCTTCTTACGATTGGAAGGCTATCG
AGTGCGTACGATTTCAGATGGTCCTGATACGCTAGCGTTAATTGAACAAGAGAAACCAGAGCTGTTGCTATTGGATATCA
TGATGCCAGGCATGAGTGGCTACCAGGTATGCAGCGAGCTACGTAACACTTACGACCACGCAGAACTGCCGATCATCATG
TTAACGGCATTAAGCCAGACAGAAGATCGTGTAAGAGGCTTCGAGGCTGGTGCAAATGATTACTTGTCCAAACCATTTAA
TAAACAAGAACTCGCCGCTCGAATCCAAGCGCATTTGACAGCAAGCAAAGCCGAAATGCGTCACATGGAAAACAAGTTGC
TTGAATCTGAGCTACGTCAACGCGCAGAAGTAGAAGCTAGTTTACTTGAAACACAAGGACGTTTGTTAGAGCAACTTGAG
TCTGCTCCAGAAGCCATCATCTGCTTGAGAGAAGACCAACGAATTCGCTTTGCCAACGAGGCGGCTTGTAAACTCTTCAA
ACGCAGCCTAGAACAGTTAAAACGCTCATCAGCTGATGAACTCATTGCGCCAAAATTCTTAACCGTCAAGCAACCACACT
ACTGTGGCAAGATTGATATCTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATTCTCAAACTGCCAGAAGGCTCT
GGTTTAGACGTTATGTACATCTTTAACGTTGGTGGTGGAGCAAACGCAGCACGTATTCATAATCTGGAAACGGCAGTAGA
AGTTCTTTCATGCTATGCGTTCGATGGAGACAAAGATCAACTACAAAAACTGAAAGAGCTGGGCGGAGAGTTTACTCGTC
TTGCCGACAAAGCATTAGGCAATAAGAAAGATAAACAAGAGTTGATGCGTGAAGTACTGGTTGATGCGATGACACATGCT
TTAGAATACTGGGAGTCCGTTACAGGAGAAACCAAGTTTGCTTTCGCTGAGCAAAGCGGCTTTTGGCGTGTTTACCTAGA
CCGCAGTACATTACAGACTCGAACACTTGATAAATACATGCGCATCGAAACTTTGCCAAAAACACCACGCTGGAGAACCG
TTTTAAACTCGATAGAGTTTATTCTTGAGCACTGTAAAGAACAAAGCCCAGAACGTGCTTACATCGAAGCACAGCGGGAC
AAACTGCAAAGGCTCCTCACTAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766