Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   DV114_RS10630 Genome accession   NZ_CP031251
Coordinates   2203579..2204838 (-) Length   419 a.a.
NCBI ID   WP_101755739.1    Uniprot ID   A0A9X7F836
Organism   Neisseria subflava strain M18660     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2198579..2209838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV114_RS10615 - 2199245..2200267 (-) 1023 WP_114926483.1 lysozyme inhibitor LprI family protein -
  DV114_RS10620 gltS 2200373..2201587 (-) 1215 WP_101755737.1 sodium/glutamate symporter -
  DV114_RS10625 - 2201804..2203210 (-) 1407 WP_107696789.1 tetratricopeptide repeat protein -
  DV114_RS10630 kpsS 2203579..2204838 (-) 1260 WP_101755739.1 capsule biosynthesis protein Regulator
  DV114_RS10635 - 2204975..2207089 (-) 2115 WP_114926484.1 capsular polysaccharide biosynthesis protein -
  DV114_RS10640 rfbC 2207113..2207652 (-) 540 WP_162817341.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  DV114_RS10645 rfbA 2207706..2208572 (-) 867 WP_070606309.1 glucose-1-phosphate thymidylyltransferase RfbA -
  DV114_RS10650 rfbB 2208646..2209713 (-) 1068 WP_070606307.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 48650.65 Da        Isoelectric Point: 9.5189

>NTDB_id=263636 DV114_RS10630 WP_101755739.1 2203579..2204838(-) (kpsS) [Neisseria subflava strain M18660]
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLANWLTENGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYIVQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLVQQEY
KAPTPVRGGFMPMAKNAVRYYIELFRNPNKYPNYIHHRASNAGHYLKLWSISILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFSSVRSFLLHILASFAAHAPADTNLIIKHHPMDRGFIDYSRDIKRFIKKHPKLKGRITYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKNTSDFSTPTT

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=263636 DV114_RS10630 WP_101755739.1 2203579..2204838(-) (kpsS) [Neisseria subflava strain M18660]
ATGAAACAGACCGTCCTCAAAAACAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCAATTGGCTGACTGAAAACGGCAAAACTGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAATTCTTGCAA
GAATACATCGTTCAACATCACATCCAGGCGGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCATTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTTTGGAACAATTCCCCAAGCTGGTCCAGCAAGAATAC
AAAGCGCCGACGCCGGTACGCGGCGGGTTTATGCCCATGGCCAAAAATGCCGTCCGTTACTATATCGAATTGTTCCGCAA
TCCGAACAAGTACCCGAACTACATCCACCACCGCGCATCCAATGCCGGCCATTACCTCAAACTGTGGTCGATCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGCGTGGAGGCGGGCAAATACGGCAAATTTTTTATT
GTTCCCTTGCAGGTATTCAACGACAGCCAAGTCCGCATCCATTGTGACTTTTCCAGCGTCCGCAGCTTCCTGCTCCATAT
TTTGGCCTCCTTTGCCGCGCACGCGCCTGCCGATACCAACCTCATCATCAAGCATCATCCGATGGACCGCGGCTTTATCG
ACTACTCGCGCGACATCAAACGCTTTATCAAAAAACACCCCAAACTCAAAGGCCGTATCACTTACGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGCCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGTCTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGCATTACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGTAACTTC
TACAGTCAGGTGTTTTTTCCCAACAAAAACACATCCGACTTTTCTACACCGACAACCTGA

Domains

Predicted by InterProScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(89-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9X7F836

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

39.031

93.556

0.365