Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C1H20_RS06120 Genome accession   NZ_CP025750
Coordinates   1405783..1406184 (+) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. campestris strain 3811     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400783..1411184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C1H20_RS06090 - 1401216..1401217 (-) 2 WP_087942078.1 IS5 family transposase -
  C1H20_RS06100 tsaB 1401864..1402583 (+) 720 WP_012437700.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  C1H20_RS06105 - 1402583..1403506 (+) 924 WP_012437701.1 ADP-ribosylglycohydrolase family protein -
  C1H20_RS06110 - 1403723..1404598 (-) 876 WP_012437702.1 energy transducer TonB -
  C1H20_RS06115 gshB 1404595..1405545 (-) 951 WP_012437703.1 glutathione synthase -
  C1H20_RS06120 pilG 1405783..1406184 (+) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  C1H20_RS06125 - 1406202..1406564 (+) 363 WP_011038047.1 response regulator -
  C1H20_RS06130 - 1406564..1407094 (+) 531 WP_014508568.1 chemotaxis protein CheW -
  C1H20_RS06135 - 1407134..1409170 (+) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=263621 C1H20_RS06120 WP_011038048.1 1405783..1406184(+) (pilG) [Xanthomonas campestris pv. campestris strain 3811]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=263621 C1H20_RS06120 WP_011038048.1 1405783..1406184(+) (pilG) [Xanthomonas campestris pv. campestris strain 3811]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTGACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment