Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DV130_RS01790 Genome accession   NZ_CP031248
Coordinates   338915..339379 (+) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae strain M26365     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 333915..344379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV130_RS12820 - 335812..335886 (+) 75 Protein_345 dihydroxyacetone kinase subunit L -
  DV130_RS01770 dhaM 335886..336266 (+) 381 WP_000443784.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  DV130_RS01775 - 336725..337438 (+) 714 WP_000499431.1 YjjG family noncanonical pyrimidine nucleotidase -
  DV130_RS01780 - 337496..338116 (+) 621 WP_050072445.1 hypothetical protein -
  DV130_RS01785 - 338252..338905 (+) 654 WP_000401326.1 uracil-DNA glycosylase -
  DV130_RS01790 mutX 338915..339379 (+) 465 WP_001135768.1 8-oxo-dGTP diphosphatase Machinery gene
  DV130_RS01795 - 339392..340660 (+) 1269 WP_050072444.1 dihydroorotase -
  DV130_RS01800 - 340674..340934 (+) 261 WP_001105925.1 hypothetical protein -
  DV130_RS01805 pdrM 340945..342306 (+) 1362 WP_000278534.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  DV130_RS01810 - 342460..343428 (+) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=263344 DV130_RS01790 WP_001135768.1 338915..339379(+) (mutX) [Streptococcus pneumoniae strain M26365]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=263344 DV130_RS01790 WP_001135768.1 338915..339379(+) (mutX) [Streptococcus pneumoniae strain M26365]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987