Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   C0067_RS17480 Genome accession   NZ_CP025684
Coordinates   3353750..3354346 (-) Length   198 a.a.
NCBI ID   WP_004893148.1    Uniprot ID   A0A483M0T8
Organism   Klebsiella pneumoniae strain L5-2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3348750..3359346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0067_RS17465 (C0067_17525) helD 3348958..3351012 (-) 2055 WP_014907883.1 DNA helicase IV -
  C0067_RS17470 (C0067_17530) - 3351137..3351583 (+) 447 WP_002898425.1 YccF domain-containing protein -
  C0067_RS17475 (C0067_17535) yccS 3351601..3353736 (+) 2136 WP_002898422.1 YccS family putative transporter -
  C0067_RS17480 (C0067_17540) sxy/tfoX 3353750..3354346 (-) 597 WP_004893148.1 TfoX/Sxy family DNA transformation protein Regulator
  C0067_RS17490 (C0067_17550) sulA 3354695..3355204 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  C0067_RS17495 (C0067_17555) ompA 3355557..3356627 (+) 1071 WP_002898408.1 porin OmpA -
  C0067_RS17500 (C0067_17560) matP 3356760..3357212 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  C0067_RS17505 (C0067_17565) - 3357398..3359155 (+) 1758 WP_128206610.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22562.12 Da        Isoelectric Point: 10.1298

>NTDB_id=263247 C0067_RS17480 WP_004893148.1 3353750..3354346(-) (sxy/tfoX) [Klebsiella pneumoniae strain L5-2]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIGGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=263247 C0067_RS17480 WP_004893148.1 3353750..3354346(-) (sxy/tfoX) [Klebsiella pneumoniae strain L5-2]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCAGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGGCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(16-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A483M0T8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment