Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C0099_RS02720 Genome accession   NZ_CP025682
Coordinates   577003..577392 (-) Length   129 a.a.
NCBI ID   WP_102246028.1    Uniprot ID   A0A2I6S3Y6
Organism   Pseudazoarcus pumilus strain SY39     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 572003..582392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0099_RS02705 (C0099_02705) - 573907..576045 (-) 2139 WP_102246025.1 methyl-accepting chemotaxis protein -
  C0099_RS02710 (C0099_02710) - 576091..576609 (-) 519 WP_102246026.1 chemotaxis protein CheW -
  C0099_RS02715 (C0099_02715) - 576614..576979 (-) 366 WP_102246027.1 PleD family two-component system response regulator -
  C0099_RS02720 (C0099_02720) pilG 577003..577392 (-) 390 WP_102246028.1 twitching motility response regulator PilG Regulator
  C0099_RS02725 (C0099_02725) - 577528..577680 (-) 153 WP_199797672.1 rubredoxin -
  C0099_RS02730 (C0099_02730) thiE 577837..578463 (+) 627 WP_102246030.1 thiamine phosphate synthase -
  C0099_RS02735 (C0099_02735) hemL 578486..579769 (+) 1284 WP_102246031.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C0099_RS02740 (C0099_02740) - 579775..580137 (+) 363 WP_102246032.1 DUF488 domain-containing protein -
  C0099_RS02745 (C0099_02745) mgtE 580162..581592 (-) 1431 WP_102246033.1 magnesium transporter -
  C0099_RS02750 (C0099_02750) mtgA 581687..582382 (-) 696 WP_102246034.1 monofunctional biosynthetic peptidoglycan transglycosylase -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14177.41 Da        Isoelectric Point: 6.4605

>NTDB_id=263215 C0099_RS02720 WP_102246028.1 577003..577392(-) (pilG) [Pseudazoarcus pumilus strain SY39]
MDLTGLRVMVIDDSNTIRRSAEIFLGQAGCDVVLAEDGFDALAKIADHQPDVIFMDIMMPRLDGYQTCALIKRNARLAAT
PVVMLSSKDGLFDRARGRMAGSSEYLTKPFTKDSLLKTVAEHALRAKTD

Nucleotide


Download         Length: 390 bp        

>NTDB_id=263215 C0099_RS02720 WP_102246028.1 577003..577392(-) (pilG) [Pseudazoarcus pumilus strain SY39]
ATGGACCTGACCGGACTTCGGGTGATGGTCATCGATGACAGCAACACCATCCGGCGCAGCGCCGAGATCTTTCTCGGCCA
GGCCGGATGCGACGTGGTGCTGGCCGAGGACGGCTTCGATGCGCTCGCCAAGATCGCCGACCACCAGCCCGACGTGATCT
TCATGGACATCATGATGCCGCGCCTCGACGGCTACCAGACCTGCGCGCTGATCAAGCGCAACGCGCGCCTGGCGGCCACG
CCGGTGGTCATGCTCTCGTCCAAGGACGGGCTGTTCGACCGCGCGCGCGGGCGCATGGCCGGCTCCAGCGAATACCTCAC
CAAGCCTTTCACGAAGGACAGCCTGCTCAAGACTGTCGCCGAACACGCCTTGCGGGCGAAAACCGACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I6S3Y6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.333

93.023

0.589

Multiple sequence alignment