Detailed information NTG0263197

Bioinformatically predicted

Overview

• Name: sxy/tfoX
• Type: Regulator
• Locus tag: C0R48_RS15825
• Genome accession: NZ_CP025676
• Coordinates: 3031930..3032559 (-)
• Length: 209 a.a.
• NCBI ID: WP_000839162.1
• Uniprot ID: A0A2T3RS91
• Organism: Escherichia albertii strain ChinaSP140150
• Function: positive regulator of competence gene (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
ICE	3018022..3032359	3031930..3032559	flank	-429

Gene organization within MGE regions

Location: 3018022..3032559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0R48_RS15755	-	3018085..3020565 (+)	2481	WP_102204099.1	exonuclease	-
C0R48_RS15760	-	3020632..3020883 (+)	252	WP_000273158.1	DUF4224 domain-containing protein	-
C0R48_RS15765	-	3020852..3021871 (+)	1020	WP_024227504.1	tyrosine-type recombinase/integrase	-
C0R48_RS15770	yccA	3022280..3022939 (+)	660	WP_000375136.1	FtsH protease modulator YccA	-
C0R48_RS15775	tusE	3023031..3023360 (+)	330	WP_059251577.1	sulfurtransferase TusE	-
C0R48_RS15780	yccX	3023357..3023635 (-)	279	WP_000048219.1	acylphosphatase	-
C0R48_RS15785	rlmI	3023729..3024919 (+)	1191	WP_059251552.1	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	-
C0R48_RS15790	hspQ	3024977..3025294 (+)	318	WP_001295356.1	heat shock protein HspQ	-
C0R48_RS15795	-	3025339..3025752 (-)	414	WP_002462360.1	CoA-binding protein	-
C0R48_RS15800	-	3025925..3026587 (+)	663	WP_000847777.1	DUF2057 family protein	-
C0R48_RS15805	mgsA	3026683..3027141 (+)	459	WP_000424182.1	methylglyoxal synthase	-
C0R48_RS15810	helD	3027173..3029227 (-)	2055	WP_000420534.1	DNA helicase IV	-
C0R48_RS15815	-	3029350..3029796 (+)	447	WP_001261228.1	YccF domain-containing protein	-
C0R48_RS15820	yccS	3029806..3031970 (+)	2165	Protein_2972	YccS family putative transporter	-
C0R48_RS15825	sxy/tfoX	3031930..3032559 (-)	630	WP_000839162.1	TfoX/Sxy family DNA transformation protein	Regulator

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 24291.21 Da
• Isoelectric Point: 9.0264

>NTDB_id=263197 C0R48_RS15825 WP_000839162.1 3031930..3032559(-) (sxy/tfoX) [Escherichia albertii strain ChinaSP140150]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVNDTVFAMVADGELYLRACEQSVQYCVKHPPVWLTYKKCGRPVTLN
YYRVDESLWRNQQKLVRLSKYSLDAALKEKCTRNNLQRLKDLPNMSYHLEAILGEVGIKDVRTLRILGAKMCWLRLRQHN
SQVTEKILFMLEGAIIDIHEAALPVARRQELAEWAESIVPKPEFPTEPE

Nucleotide

• Length: 630 bp

>NTDB_id=263197 C0R48_RS15825 WP_000839162.1 3031930..3032559(-) (sxy/tfoX) [Escherichia albertii strain ChinaSP140150]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAGTCACAAGAATACCTTGCAACGTTAGGCACCATTGAATATCGATCGCT
GTTTGGCAGTTACAGTTTGACGGTTAACGATACGGTATTTGCGATGGTTGCTGATGGTGAGTTGTATCTACGGGCTTGTG
AACAAAGCGTACAGTACTGTGTAAAACATCCGCCAGTCTGGCTGACATATAAAAAGTGCGGCCGACCCGTGACTCTCAAT
TACTACCGGGTTGATGAAAGTCTATGGCGTAACCAACAGAAATTAGTTCGCTTGTCGAAATATTCCCTGGATGCTGCGCT
GAAAGAGAAATGTACGCGCAACAATCTCCAGCGACTGAAAGATTTGCCGAATATGTCTTATCACCTGGAGGCGATTCTCG
GTGAAGTGGGGATCAAGGATGTGCGGACTTTACGGATCCTTGGCGCAAAAATGTGCTGGTTGCGACTACGTCAGCATAAT
AGCCAGGTGACGGAGAAGATCTTATTCATGCTTGAAGGCGCAATTATTGATATTCATGAAGCAGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCTGAATGGGCTGAATCTATTGTGCCGAAACCGGAGTTTCCGACGGAACCTGAGTAA

Domains

Predicted by InterproScan.

• TfoX C-terminal domain (TfoX_C) (117-194)

• TfoX N-terminal domain (TfoX_N) (14-106)

3D structure

• AlphaFold DB: A0A2T3RS91

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sxy/tfoX	Escherichia coli BW25113 strain K-12	90.431	100	0.904