Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   DV131_RS05855 Genome accession   NZ_CP031246
Coordinates   1074300..1074566 (+) Length   88 a.a.
NCBI ID   WP_001808618.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain M26368     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1069300..1079566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV131_RS05835 - 1069512..1070021 (+) 510 WP_000619950.1 N-acetyltransferase -
  DV131_RS05840 pheT 1070098..1072503 (+) 2406 WP_061766249.1 phenylalanine--tRNA ligase subunit beta -
  DV131_RS05845 - 1072571..1073572 (-) 1002 WP_050168350.1 endonuclease/exonuclease/phosphatase family protein -
  DV131_RS05850 - 1073728..1074216 (+) 489 Protein_1066 IS30 family transposase -
  DV131_RS05855 HI0659 1074300..1074566 (+) 267 WP_001808618.1 helix-turn-helix transcriptional regulator Machinery gene
  DV131_RS05860 metE 1074827..1077076 (+) 2250 WP_000108210.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  DV131_RS05865 metF 1077140..1078006 (+) 867 WP_000089976.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9622.15 Da        Isoelectric Point: 4.4893

>NTDB_id=263162 DV131_RS05855 WP_001808618.1 1074300..1074566(+) (HI0659) [Streptococcus pneumoniae strain M26368]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=263162 DV131_RS05855 WP_001808618.1 1074300..1074566(+) (HI0659) [Streptococcus pneumoniae strain M26368]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534