Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SSA_RS06070 Genome accession   NC_009009
Coordinates   1261330..1261794 (-) Length   154 a.a.
NCBI ID   WP_002904550.1    Uniprot ID   A0ABM5NIU9
Organism   Streptococcus sanguinis SK36     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1256330..1266794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS06055 (SSA_1233) plsY 1257036..1257686 (+) 651 WP_002912552.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -
  SSA_RS06060 (SSA_1234) nt5e 1257726..1259885 (-) 2160 WP_011837008.1 cell surface ecto-5'-nucleotidase Nt5e -
  SSA_RS06065 (SSA_1235) - 1260049..1261317 (-) 1269 WP_011837009.1 dihydroorotase -
  SSA_RS06070 (SSA_1236) mutX 1261330..1261794 (-) 465 WP_002904550.1 NUDIX hydrolase Machinery gene
  SSA_RS06075 (SSA_1237) - 1261803..1262456 (-) 654 WP_011837010.1 uracil-DNA glycosylase -
  SSA_RS06080 (SSA_1238) - 1262492..1263244 (-) 753 WP_011837011.1 DUF4336 domain-containing protein -
  SSA_RS06085 (SSA_1239) - 1263241..1264779 (-) 1539 WP_011837012.1 glycosyltransferase family 39 protein -
  SSA_RS06090 (SSA_1240) pyrE 1264891..1265520 (-) 630 WP_011837013.1 orotate phosphoribosyltransferase -
  SSA_RS06095 (SSA_1241) pyrF 1265599..1266291 (-) 693 WP_002904555.1 orotidine-5'-phosphate decarboxylase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17831.21 Da        Isoelectric Point: 4.3092

>NTDB_id=26299 SSA_RS06070 WP_002904550.1 1261330..1261794(-) (mutX) [Streptococcus sanguinis SK36]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=26299 SSA_RS06070 WP_002904550.1 1261330..1261794(-) (mutX) [Streptococcus sanguinis SK36]
ATGGTTCAGTTAGCAACGATTTGTTATATCGATAATGGCCGGGAGTTTCTCATGCTGCACCGCAACAAAAAGCCCAATGA
TGTCCATGCTGGGAAGTGGATTGGTGTTGGTGGCAAGCTAGAGCGAGGAGAAACCCCGCAGGAATGCGCTGCACGTGAGA
TTCTAGAGGAAACAGGTCTAAAGGCTAAGCCTGTTCTCAAAGGTGTTATCACTTTCCCAGAGTTTACTCCCGACTTGGAC
TGGTACACCTATGTTTTCAAGGTGACTGAGTTCGAGGGTGAACTGATTGACTGCAACGAAGGGACTTTGGAGTGGGTGCC
CTATGATCAGGTTTTATCTAAACCAACTTGGGAAGGCGATCATACCTTTGTTGAGTGGCTTCTAGAAGACAAGCCTTTCT
TTTCTGCAAAGTTTGTTTATGACGGTGATAAGCTCTTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

94.805

100

0.948

Multiple sequence alignment