Detailed information NTG0262900

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: DV384_RS07625
• Genome accession: NZ_CP031241
• Coordinates: 1546199..1548058 (+)
• Length: 619 a.a.
• NCBI ID: WP_114934670.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M17648
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1541199..1553058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV384_RS07595	yihI	1542491..1543051 (+)	561	WP_114934666.1	Der GTPase-activating protein YihI	-
DV384_RS07600	-	1543055..1543495 (+)	441	WP_114934667.1	DUF2489 domain-containing protein	-
DV384_RS07605	-	1543559..1544185 (-)	627	WP_050847439.1	response regulator	-
DV384_RS07610	lysA	1544391..1545638 (-)	1248	WP_114934668.1	diaminopimelate decarboxylase	-
DV384_RS09185	-	1545679..1545795 (-)	117	WP_114934669.1	lipoprotein	-
DV384_RS07620	cyaY	1545892..1546197 (+)	306	WP_021034482.1	iron donor protein CyaY	-
DV384_RS07625	recQ	1546199..1548058 (+)	1860	WP_114934670.1	DNA helicase RecQ	Machinery gene
DV384_RS07630	proS	1548143..1549861 (+)	1719	WP_114934671.1	proline--tRNA ligase	-
DV384_RS07635	lptD	1549949..1552297 (-)	2349	WP_114934672.1	LPS assembly protein LptD	-

Sequence

Protein

• Length: 619 a.a.
• Molecular weight: 70144.47 Da
• Isoelectric Point: 8.3559

>NTDB_id=262900 DV384_RS07625 WP_114934670.1 1546199..1548058(+) (recQ) [Haemophilus influenzae strain M17648]
MQDSPLPSKTIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFEGLTLVISPLISL
MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVSFIAIDEAHCISQWGHD
FRPEYTQLGGLKASFPDAPIMALTATADYATRQDILTHLNLKNPHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGK
SGIIYCNSRNKVERITESLRNKGVSAAAYHAGMETARRDRVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSI
ESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILFEKPETPQRQIEQHKLEAIGEFAESQICRRLVLLNYFGEYRQTPC
NNCDICLDPPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKSKEHWQSVIRQLI
HLGFVQQVISELNPTLKLTESAKVILKGEEPLELAMPRISSISKIAHNPQRQGVANYDKDLFARLRFLRKQIADKENIPP
YIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQEHKAILANAQNND

Nucleotide

• Length: 1860 bp

>NTDB_id=262900 DV384_RS07625 WP_114934670.1 1546199..1548058(+) (recQ) [Haemophilus influenzae strain M17648]
ATGCAGGATTCTCCTTTACCATCAAAAACAATAGAAAAACCGACCGCACTTTCTGTTTTGAAATCGGTTTTTGGTTATCA
ATCTTTCCGTAAAGGGCAGGAAGAAGTCATCAATGCCGCTTTAAACGGACAAGATGCTTTGGTGGTAATGGCAACGGGGA
ATGGCAAATCGCTTTGTTATCAAATTCCCGCCCTTTGTTTTGAGGGTTTAACGTTAGTGATTTCTCCACTGATTTCCTTG
ATGAAAGATCAAGTGGATCAGCTGCAAGCTAATGGCATTGAGGCGGATTTTCTTAATTCTAGTCAGACTTTAGAACAGCA
GCAACAAGTACAAAATAAGCTTATTTCTGGGCAACTTAAACTGCTTTATGTGTCGCCAGAAAAAGTGATGACGAACAGTT
TCTTTCAACTTATTTCTTATAGTAAAGTCAGCTTTATTGCAATTGATGAAGCACACTGTATTTCTCAATGGGGACATGAT
TTTCGCCCTGAATATACCCAGCTTGGCGGTTTAAAAGCGAGTTTCCCTGATGCGCCGATTATGGCACTTACGGCAACGGC
AGATTACGCAACTCGACAAGATATTTTGACGCATCTTAATCTGAAAAATCCGCATAAATATATTGGTAGTTTTGATCGAC
CAAACATTCGTTATACCTTGGAAGAAAAATATAAACCAATGGAGCAATTGACACGTTTTGTGTTGGCTCAAAAGGGCAAG
AGTGGGATTATTTATTGCAACAGTCGAAACAAGGTTGAACGAATTACGGAAAGTTTACGCAATAAAGGTGTCTCTGCCGC
AGCTTATCACGCGGGAATGGAAACGGCACGGCGTGATCGTGTGCAACAGGATTTTCAGCGTGATAATGTGCAAGTAGTCG
TCGCAACCATTGCTTTTGGAATGGGGATTAATAAATCCAATGTACGGTTTGTTGCCCATTTTGATTTACCTCGCAGCATT
GAATCTTACTATCAAGAAACAGGTCGAGCAGGACGTGATGATTTACCTGCAGAGGCGGTTTTGTTTTATGAACCAGCTGA
TTACGCTTGGTTACAAAAAATTCTCTTCGAAAAACCAGAAACGCCACAGCGTCAGATTGAGCAGCATAAATTAGAAGCTA
TTGGGGAATTTGCGGAAAGCCAGATTTGTCGCCGTTTAGTTCTTCTCAATTATTTTGGCGAGTATCGACAAACACCATGC
AATAACTGTGATATTTGCCTTGATCCTCCTAAAAAATATGATGGTTTAGTCGATGCGCAAAAAGTAATGTCTACCATTTA
TCGAGTGGGGCAATGTTTTGGTGCACATTATGTGATTGCGGTGCTGCGTGGCATGCACAATCAGAAAATTATTGAACGCC
AACACCATAAACTTTCGGTGTATGGCATCGGAAAAGATAAAAGCAAAGAGCATTGGCAGTCTGTTATTCGTCAGCTTATT
CATTTGGGTTTTGTGCAACAGGTTATTAGTGAATTAAATCCAACGTTGAAACTTACTGAAAGTGCGAAAGTGATTTTGAA
AGGCGAAGAACCGTTAGAATTGGCAATGCCTCGTATTTCTTCAATCAGTAAAATTGCCCATAATCCACAACGTCAAGGTG
TTGCAAATTACGATAAGGATTTATTTGCACGCTTGCGTTTCCTACGCAAACAAATTGCCGATAAAGAAAATATTCCGCCG
TACATTGTCTTTAATGATGCGACGTTGCAAGAAATGGCACAATATATGCCAACAAGCAATATTGAAATGCTGCAAATTAA
TGGCGTGGGCTCTATCAAATTAGAGCGGTTTGGGCAGCCGTTTATGGCATTGATTCAAGAACATAAGGCAATTTTGGCGA
ACGCACAAAATAATGACTAA

Domains

Predicted by InterProScan.

• RQC domain (RQC) (409-518)

• HRDC domain (HRDC) (539-605)

• RecQ zinc-binding (RecQ_Zn_bind) (347-407)

• DEAD/DEAH box helicase (DEAD) (32-188)

• Helicase conserved C-terminal domain (Helicase_C) (228-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	39.597	96.284	0.381