Detailed information NTG0262862

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: DV384_RS02010
• Genome accession: NZ_CP031241
• Coordinates: 425031..426452 (+)
• Length: 473 a.a.
• NCBI ID: WP_114890374.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M17648
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 420031..431452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV384_RS02000	-	423231..424139 (+)	909	WP_114890376.1	DUF5655 domain-containing protein	-
DV384_RS02005	-	424143..425018 (+)	876	WP_114890375.1	EamA/RhaT family transporter	-
DV384_RS02010	sbcB	425031..426452 (+)	1422	WP_114890374.1	exodeoxyribonuclease I	Machinery gene
DV384_RS02015	phoR	427182..428459 (-)	1278	WP_005691999.1	phosphate regulon sensor histidine kinase PhoR	-
DV384_RS02020	phoB	428456..429151 (-)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
DV384_RS02025	pstB	429248..430015 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
DV384_RS02030	pstA	430025..430873 (-)	849	WP_114890373.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54214.61 Da
• Isoelectric Point: 5.5550

>NTDB_id=262862 DV384_RS02010 WP_114890374.1 425031..426452(+) (sbcB) [Haemophilus influenzae strain M17648]
MAKNFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRADLYTKKLVLEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNGNVETELYNGFFSNADKNNIAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=262862 DV384_RS02010 WP_114890374.1 425031..426452(+) (sbcB) [Haemophilus influenzae strain M17648]
ATGGCAAAAAATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGCGAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCGCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCCGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAACGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCGATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGTGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGAGCAGATTTATATACAAAAAAATTGGTATTAGAAGAAAGGGGAGTTTCATCCG
TTCCGTTAAAACTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGGTAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATAGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAA

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (9-188)

• Exonuclease C-terminal (ExoI_SH3) (208-468)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.365	98.52	0.545