Detailed information NTG0262697

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: DV400_RS04595
• Genome accession: NZ_CP031236
• Coordinates: 930735..932156 (-)
• Length: 473 a.a.
• NCBI ID: WP_050949199.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M25267
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 925735..937156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV400_RS04575	pstA	926297..927145 (+)	849	WP_021035193.1	phosphate ABC transporter permease PstA	-
DV400_RS04580	pstB	927155..927922 (+)	768	WP_021035192.1	phosphate ABC transporter ATP-binding protein PstB	-
DV400_RS04585	phoB	927999..928694 (+)	696	WP_050847118.1	phosphate regulon transcriptional regulator PhoB	-
DV400_RS04590	phoR	928691..929956 (+)	1266	WP_050949198.1	phosphate regulon sensor histidine kinase PhoR	-
DV400_RS04595	sbcB	930735..932156 (-)	1422	WP_050949199.1	exodeoxyribonuclease I	Machinery gene
DV400_RS04600	-	932169..933044 (-)	876	WP_050949200.1	DMT family transporter	-
DV400_RS04605	-	933048..933956 (-)	909	WP_021035187.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54526.82 Da
• Isoelectric Point: 5.1125

>NTDB_id=262697 DV400_RS04595 WP_050949199.1 930735..932156(-) (sbcB) [Haemophilus influenzae strain M25267]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDIGSMAPLVHVSGMLGNYRRNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLVKSADELRTDLYTKKSELEERGVPPVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVTDIFNEERQFESNDNVETELYNGFFSNADKNNMSILRSLPAEKLAEHGLAFEDKR
IPELLFHYRARHFYKTLTRAEQIKWQKYRQNKLEKSAVDFESSLQRLAEEHSDNPEKLSLLQQVYEYGTKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=262697 DV400_RS04595 WP_050949199.1 930735..932156(-) (sbcB) [Haemophilus influenzae strain M25267]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCCGCAACAGATCGTCCTGCACAATT
TGCGGGTATTCGTACAGACGCTGATTTTAATATTATTGGCGAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCGGTAATGGTAACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCTGAGCCTGAATTT
GCCGCAAACATTTTAGCAGAGTTTTCCCAACCCAATACTTGTGTCATGGGCTATAACAATATTCGCTATGATGATGAAAT
GACACGTTATACATTTTATCGTAATTTTATTGATCCCTATGAATATAGCTGGAAAAACGGGAATTCACGCTGGGATTTGT
TAGATTTAGTACGAGCTTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGATGGGATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCATGATGCAATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAGTTATTCCAATATTTCTTTGAAAACCGTGGTAAAAAAGAAATTG
AAAAGTTGGTTGATATAGGCTCAATGGCACCTTTAGTACATGTTTCTGGGATGTTAGGGAATTATCGTAGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTTATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGTCAAAAGTGCGGATGAATTGCGGACAGATTTATATACCAAAAAATCGGAATTAGAAGAAAGGGGAGTTCCACCTG
TTCCATTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCGCCAGCCAAAACCTTGTTGCCAGAAACAGCAAATCGC
TTGGGTATTGATCGTCAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGACGGA
TATTTTTAATGAAGAACGTCAATTTGAATCAAATGATAATGTGGAAACTGAGCTATACAATGGCTTTTTCAGCAATGCTG
ATAAAAATAATATGTCTATTTTACGTAGTTTACCAGCAGAAAAATTAGCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCCTGAATTATTGTTCCATTATCGGGCTCGCCATTTTTATAAAACCCTTACACGCGCTGAACAAATTAAATGGCAGAA
ATATAGACAGAATAAACTTGAAAAAAGTGCGGTAGATTTTGAATCAAGTTTACAACGTTTAGCAGAGGAACATTCAGATA
ATCCTGAAAAACTATCTTTGTTACAACAAGTATATGAATATGGTACAAAACTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-469)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.794	98.52	0.55