Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C0R09_RS10165 Genome accession   NZ_CP025545
Coordinates   2144930..2145886 (+) Length   318 a.a.
NCBI ID   WP_003338614.1    Uniprot ID   -
Organism   Brevibacillus laterosporus strain ZQ2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2139930..2150886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0R09_RS10150 (C0R09_10150) - 2140904..2141791 (-) 888 WP_101668055.1 hypothetical protein -
  C0R09_RS10155 (C0R09_10155) - 2142010..2143194 (+) 1185 WP_096887567.1 pyridoxal phosphate-dependent aminotransferase -
  C0R09_RS10160 (C0R09_10160) asnS 2143307..2144599 (+) 1293 WP_003341640.1 asparagine--tRNA ligase -
  C0R09_RS10165 (C0R09_10165) ceuB 2144930..2145886 (+) 957 WP_003338614.1 ABC transporter permease Machinery gene
  C0R09_RS10170 (C0R09_10170) - 2145873..2146829 (+) 957 WP_101668056.1 iron chelate uptake ABC transporter family permease subunit -
  C0R09_RS10175 (C0R09_10175) - 2146823..2147581 (+) 759 WP_003338616.1 ABC transporter ATP-binding protein -
  C0R09_RS10180 (C0R09_10180) - 2147988..2148953 (+) 966 WP_003338617.1 siderophore ABC transporter substrate-binding protein -
  C0R09_RS10185 (C0R09_10185) - 2149129..2149863 (+) 735 WP_003341632.1 DnaD domain-containing protein -
  C0R09_RS10190 (C0R09_10190) - 2150127..2150567 (+) 441 WP_003341630.1 hypothetical protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35360.93 Da        Isoelectric Point: 9.9561

>NTDB_id=262497 C0R09_RS10165 WP_003338614.1 2144930..2145886(+) (ceuB) [Brevibacillus laterosporus strain ZQ2]
MKKRYLFLALIILSMCSLFIGVKNITPLDILNFNNEQVEIFLISRVPRLVSIIVAGISLSICGLIMQQITRNKFVSPTTA
GTMDCARLGVLVSLMLFTTESPIVKMIVAFIFALGGTFIFMKILRKIKFKDNIFIPLVGIMFGNIISSISTFFAYKYDLI
QNISSWLQGDFSMIMKGRYELLYISIPLVIIAFLYANKFTVAGMGEEFAVNLGLNYQRVINIGLIIVAMISSLVLLTVGM
IPFLGLIIPNIVSIYRGDNLRNSLPHTALLGAVFVLACDILGRIVIFPYELSIGLMVGVIGSGIFLYLLMRRNAYATM

Nucleotide


Download         Length: 957 bp        

>NTDB_id=262497 C0R09_RS10165 WP_003338614.1 2144930..2145886(+) (ceuB) [Brevibacillus laterosporus strain ZQ2]
ATGAAAAAGAGATATTTATTTTTAGCATTAATCATCCTATCCATGTGCTCCTTATTTATTGGAGTTAAAAACATTACTCC
ACTTGACATTCTAAATTTTAATAATGAGCAGGTTGAAATTTTCTTAATTAGCCGTGTTCCACGATTAGTTAGCATTATTG
TGGCTGGTATTAGCCTTAGTATCTGTGGCTTAATCATGCAGCAGATCACCCGTAATAAATTCGTATCTCCTACTACTGCT
GGAACGATGGACTGCGCTCGATTAGGAGTGCTGGTATCACTCATGCTATTTACTACGGAGAGTCCGATTGTAAAGATGAT
TGTTGCATTTATTTTTGCCTTAGGCGGCACCTTTATTTTTATGAAAATCCTTAGAAAAATAAAGTTCAAAGACAATATCT
TTATTCCATTGGTAGGTATTATGTTTGGTAATATTATCAGTTCTATAAGCACTTTCTTTGCTTATAAATATGACCTGATA
CAAAATATATCCTCATGGTTACAAGGAGACTTCTCCATGATCATGAAGGGAAGATATGAGCTTTTGTATATTAGTATCCC
GCTTGTCATTATCGCCTTTCTTTATGCGAATAAATTCACGGTCGCAGGAATGGGAGAAGAATTCGCGGTTAATCTAGGAC
TCAACTATCAGCGTGTGATCAATATCGGATTAATCATCGTTGCTATGATTTCCTCTCTGGTATTGCTCACAGTCGGAATG
ATTCCATTCCTTGGTTTAATTATTCCTAACATCGTTTCCATTTATCGTGGGGATAATCTACGGAACAGTCTACCGCATAC
AGCCTTACTCGGAGCCGTATTTGTCCTAGCATGTGATATATTAGGGCGTATCGTAATTTTTCCTTATGAGCTCTCGATTG
GACTTATGGTCGGAGTTATCGGCAGTGGAATCTTCCTGTACTTACTCATGAGGAGAAATGCATATGCAACAATGTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

57.98

96.541

0.56

Multiple sequence alignment