Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   C0J00_RS09735 Genome accession   NZ_CP025536
Coordinates   1929597..1930313 (+) Length   238 a.a.
NCBI ID   WP_104968880.1    Uniprot ID   A0A2L0D7D3
Organism   Streptococcus pluranimalium strain TH11417     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1924597..1935313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS09720 (C0J00_09725) - 1924723..1925460 (+) 738 WP_104968664.1 GntR family transcriptional regulator -
  C0J00_RS09725 (C0J00_09730) treC 1925639..1927264 (-) 1626 WP_104968665.1 alpha,alpha-phosphotrehalase -
  C0J00_RS09730 (C0J00_09735) treP 1927411..1929396 (-) 1986 WP_104968666.1 PTS system trehalose-specific EIIBC component -
  C0J00_RS09735 (C0J00_09740) treR 1929597..1930313 (+) 717 WP_104968880.1 trehalose operon repressor Regulator
  C0J00_RS09740 (C0J00_09745) - 1930348..1931505 (-) 1158 WP_104968667.1 glycerate kinase -
  C0J00_RS09745 (C0J00_09750) - 1931685..1933325 (+) 1641 WP_104968668.1 phosphoenolpyruvate carboxykinase (ATP) -
  C0J00_RS09750 (C0J00_09755) - 1933453..1934097 (-) 645 WP_104968669.1 glutamate racemase -
  C0J00_RS09755 (C0J00_09760) - 1934102..1934347 (-) 246 WP_233995843.1 hypothetical protein -
  C0J00_RS09760 (C0J00_09765) dtd 1934437..1934880 (-) 444 WP_104968671.1 D-aminoacyl-tRNA deacylase -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27289.25 Da        Isoelectric Point: 7.2016

>NTDB_id=262373 C0J00_RS09735 WP_104968880.1 1929597..1930313(+) (treR) [Streptococcus pluranimalium strain TH11417]
MKKYEKVFRNLEAAINQGIYQVNDYLPTEEELAKEYAVSRDTIRKALKLLAEHGLIQKRQGSGSQIIKHERINFPVSALT
SFQEIAQAQGMATTTNVIAIDKLIVDGKMSELTGFPPKSHVWRITRQRVMEGVASVLDIDYLLTTFVPEIDRSIAEKSIY
DYLENHLHLMIDLAEKEITIDQTNQQDSILLDLAGEHHVVSIKSKVFLTNGQQFQFTESRHKLDKFRFVDFAKRRPAN

Nucleotide


Download         Length: 717 bp        

>NTDB_id=262373 C0J00_RS09735 WP_104968880.1 1929597..1930313(+) (treR) [Streptococcus pluranimalium strain TH11417]
ATGAAAAAGTATGAGAAAGTTTTCCGAAATTTAGAGGCTGCTATTAACCAAGGAATCTACCAAGTTAACGACTATTTACC
AACCGAAGAAGAGTTGGCTAAAGAGTATGCTGTCAGCCGAGATACCATTCGAAAAGCCTTAAAGCTCCTGGCAGAACACG
GACTTATTCAAAAACGTCAAGGTAGTGGCTCACAGATCATCAAGCATGAGCGCATTAACTTTCCTGTTTCAGCTCTTACC
AGCTTTCAGGAAATCGCCCAAGCGCAAGGGATGGCAACGACAACTAATGTCATCGCTATCGACAAACTCATTGTTGATGG
GAAGATGTCAGAACTAACTGGTTTCCCACCAAAGAGTCATGTCTGGCGTATCACGCGCCAACGCGTGATGGAAGGGGTGG
CATCTGTCCTTGATATTGACTACTTGTTGACGACTTTTGTTCCTGAAATCGATCGTTCCATTGCGGAGAAATCCATTTAT
GATTATTTGGAAAACCACCTGCACCTTATGATTGATCTAGCTGAAAAAGAAATCACCATCGATCAGACCAATCAGCAAGA
CAGTATTCTTCTGGACTTAGCAGGTGAGCATCATGTTGTGTCCATTAAGTCCAAAGTCTTTCTCACCAATGGTCAACAAT
TTCAATTCACCGAAAGCCGGCACAAATTGGATAAATTTAGATTTGTAGATTTTGCTAAGAGAAGACCTGCAAATTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-65)

UTRA domain (UTRA)

(88-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0D7D3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

65.385

98.319

0.643

Multiple sequence alignment