Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   C0J00_RS04200 Genome accession   NZ_CP025536
Coordinates   799689..801437 (+) Length   582 a.a.
NCBI ID   WP_199773980.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain TH11417     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 794689..806437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS04170 (C0J00_04175) - 794748..795413 (+) 666 WP_104967698.1 DUF443 family protein -
  C0J00_RS10540 (C0J00_04180) - 795495..795730 (+) 236 Protein_776 DUF4176 domain-containing protein -
  C0J00_RS04180 (C0J00_04185) - 795740..796729 (+) 990 WP_104967699.1 hypothetical protein -
  C0J00_RS04185 (C0J00_04190) - 796729..797088 (+) 360 WP_104967700.1 hypothetical protein -
  C0J00_RS04190 (C0J00_04195) - 797455..797904 (+) 450 WP_104967701.1 MarR family winged helix-turn-helix transcriptional regulator -
  C0J00_RS04195 (C0J00_04200) rcrP 797897..799699 (+) 1803 WP_104967702.1 ABC transporter ATP-binding protein Regulator
  C0J00_RS04200 (C0J00_04205) rcrQ 799689..801437 (+) 1749 WP_199773980.1 ABC transporter ATP-binding protein Regulator
  C0J00_RS04205 (C0J00_04210) - 801680..802399 (+) 720 WP_104967703.1 GDSL-type esterase/lipase family protein -
  C0J00_RS04210 (C0J00_04215) - 802515..803894 (+) 1380 WP_233995872.1 metallophosphoesterase -
  C0J00_RS04215 (C0J00_04220) - 803881..804455 (+) 575 Protein_784 uracil-DNA glycosylase family protein -
  C0J00_RS04220 (C0J00_04225) rpsU 804554..804730 (+) 177 WP_002884573.1 30S ribosomal protein S21 -
  C0J00_RS04225 (C0J00_04230) - 804956..806131 (+) 1176 WP_104967704.1 CapA family protein -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64846.01 Da        Isoelectric Point: 5.6193

>NTDB_id=262348 C0J00_RS04200 WP_199773980.1 799689..801437(+) (rcrQ) [Streptococcus pluranimalium strain TH11417]
MKTKKRSLLSQSFPFLKGFRFVFVLAIMFTICSSIITVIGPDKLKEITDVITEGIVSTVDMAKIKDIGFQLAFLYGGGAL
LSYSASFIISTMIQHFSQRMRIAIAEKINRVPLSYFDAHSQGDTLSRVTNDVDNMTQALNQSLTTLVSSSVLLVGSIIMM
FKTNGIMAGTAIGSVLLGFLLSMVIMMKSQPFFKRQQDNLAAINGYVEETYTGHNLVISYNAREQAKTRFEELNQNLYSS
MWQSQFFSGIMMPMMQFIGNFGYVMVCLVGAKLVIDGDITMGTIVAFMTYVRIFSQPLGQMAQGATQMQTVSATMGRIFE
FLDAPEMEDESSKNQQLLDIKGHVDFDHVTFGYTPEKTIIKDFSAQAKPGQKVAIVGPTGAGKTTIVNLLMRFYELNSGS
ISIDQVNVHDMTREEVHNAFSMVLQDTWLFEGTIKENLIYNQTHITDEQVVEAAKAVGIHHFIMTLPKNYDSVLDDTLTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HETLMTENGFYADLYNSQFEVA

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=262348 C0J00_RS04200 WP_199773980.1 799689..801437(+) (rcrQ) [Streptococcus pluranimalium strain TH11417]
GTGAAAACTAAGAAAAGATCATTACTCAGCCAGTCTTTTCCTTTCTTGAAAGGCTTCCGGTTTGTTTTTGTACTGGCTAT
TATGTTTACCATCTGTTCAAGTATCATTACGGTTATTGGACCGGATAAGCTAAAAGAAATCACCGACGTTATTACAGAAG
GTATTGTTTCCACGGTTGACATGGCTAAAATCAAGGACATTGGTTTCCAGTTAGCCTTCCTTTATGGTGGCGGTGCTCTT
TTGTCTTACTCGGCTAGCTTTATCATTTCAACTATGATTCAGCATTTTTCACAACGCATGCGCATAGCCATTGCTGAAAA
AATTAATCGTGTGCCTTTGTCATACTTTGACGCTCATTCACAGGGAGATACTCTATCACGTGTGACCAATGATGTGGATA
ATATGACCCAGGCTTTAAACCAGAGTTTGACGACTCTCGTTTCATCTAGTGTTCTCTTAGTTGGTTCCATTATCATGATG
TTTAAAACCAATGGCATCATGGCTGGGACAGCGATTGGATCAGTTCTCTTAGGTTTCTTGCTAAGTATGGTCATTATGAT
GAAAAGCCAACCTTTCTTTAAGCGTCAGCAGGATAATTTAGCGGCGATTAATGGTTACGTTGAGGAAACGTATACAGGGC
ATAATCTGGTTATTTCATACAATGCCAGAGAACAAGCCAAAACAAGATTCGAAGAGCTCAATCAAAATCTTTACAGCAGT
ATGTGGCAGTCCCAATTTTTCTCAGGGATTATGATGCCCATGATGCAGTTTATTGGTAATTTTGGCTATGTTATGGTCTG
CTTGGTTGGAGCTAAACTGGTCATTGATGGTGACATCACGATGGGAACTATTGTCGCTTTTATGACTTATGTTCGTATCT
TCTCTCAACCTCTTGGGCAAATGGCTCAGGGGGCTACACAAATGCAAACTGTTTCCGCAACGATGGGAAGAATTTTTGAA
TTCCTCGATGCGCCTGAAATGGAAGACGAAAGTTCTAAAAATCAGCAATTATTAGACATTAAAGGTCATGTCGATTTTGA
CCATGTGACTTTTGGGTATACACCTGAAAAAACGATTATTAAGGATTTTTCAGCTCAAGCCAAACCTGGTCAAAAGGTGG
CCATTGTTGGTCCGACTGGGGCTGGTAAAACAACCATTGTCAATCTCCTCATGCGTTTTTATGAGCTCAACAGTGGTAGC
ATTAGTATCGATCAAGTCAATGTACACGACATGACGCGAGAAGAAGTCCATAATGCCTTCTCAATGGTTCTACAAGATAC
TTGGCTCTTTGAAGGGACGATCAAAGAAAACTTGATTTACAACCAGACTCATATCACAGATGAGCAAGTAGTTGAAGCGG
CAAAGGCTGTTGGAATCCATCACTTTATCATGACCCTTCCTAAAAATTACGACAGTGTCTTGGATGATACCTTAACCTTG
TCAGTTGGTCAGAAACAGCTCTTGACCATTGCACGTGCTCTTTTGAAAGATGCACCGCTCTTGATTTTGGATGAAGCGAC
CTCATCTGTCGATACACGTACGGAAGAGTTGATTCAAAAAGCCATGGACAAACTTATGGAAGGCAGAACATCCTTTGTCA
TCGCTCACCGTTTGTCAACAATCCGAAACGCTGATTTAATTTTGGTCATGAAAGATGGTAACATCATCGAGCAGGGTAAT
CATGAAACCTTGATGACTGAAAATGGTTTCTATGCGGATCTTTATAATTCGCAATTTGAAGTGGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(24-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.459

100

0.737

Multiple sequence alignment