Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   C0J00_RS04195 Genome accession   NZ_CP025536
Coordinates   797897..799699 (+) Length   600 a.a.
NCBI ID   WP_104967702.1    Uniprot ID   A0A2L0D466
Organism   Streptococcus pluranimalium strain TH11417     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 792897..804699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS04160 (C0J00_04165) - 793392..794087 (+) 696 WP_104967696.1 hypothetical protein -
  C0J00_RS04165 (C0J00_04170) - 794167..794745 (+) 579 WP_104967697.1 hypothetical protein -
  C0J00_RS04170 (C0J00_04175) - 794748..795413 (+) 666 WP_104967698.1 DUF443 family protein -
  C0J00_RS10540 (C0J00_04180) - 795495..795730 (+) 236 Protein_776 DUF4176 domain-containing protein -
  C0J00_RS04180 (C0J00_04185) - 795740..796729 (+) 990 WP_104967699.1 hypothetical protein -
  C0J00_RS04185 (C0J00_04190) - 796729..797088 (+) 360 WP_104967700.1 hypothetical protein -
  C0J00_RS04190 (C0J00_04195) - 797455..797904 (+) 450 WP_104967701.1 MarR family winged helix-turn-helix transcriptional regulator -
  C0J00_RS04195 (C0J00_04200) rcrP 797897..799699 (+) 1803 WP_104967702.1 ABC transporter ATP-binding protein Regulator
  C0J00_RS04200 (C0J00_04205) rcrQ 799689..801437 (+) 1749 WP_199773980.1 ABC transporter ATP-binding protein Regulator
  C0J00_RS04205 (C0J00_04210) - 801680..802399 (+) 720 WP_104967703.1 GDSL-type esterase/lipase family protein -
  C0J00_RS04210 (C0J00_04215) - 802515..803894 (+) 1380 WP_233995872.1 metallophosphoesterase -
  C0J00_RS04215 (C0J00_04220) - 803881..804455 (+) 575 Protein_784 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66785.62 Da        Isoelectric Point: 6.5457

>NTDB_id=262347 C0J00_RS04195 WP_104967702.1 797897..799699(+) (rcrP) [Streptococcus pluranimalium strain TH11417]
MFKLLKYLNGKEWAMIALSTVFICLAVWMDIETPAYMSDITKLLQEKGTRTADIMEPGWKMLGLSLGSFIMAVCVGFLAA
RTAASFTTRLRSEIFNQVMDYSDAEIKQFSVPSLLTRTTNDLTQLQILITMGMQVVTRGPIMAIWALTKIWGKSSEWTWS
VAIAVAVVMLLLATLLIFAFPRLQKVQKYTDGLNATMREILSGIRVVRAYNAEDYQDAKFSEQNLALTRLNLFVSRLFAL
MNPVMTVVSSGLTLAIYWIGAQMIDNIAIKMTSRAAAMASVQDRISVFSDMVVFSSYAMQVVMGFMMMVAIFIILPRALV
SAGRINEVLSLEPSIIFKKTSTEKLVEKGQVEYRNVTFKYAQESEAVVENISFKASAGQTIAFIGSTGSGKTSLVKLLPR
FYDVTSGQILVDGIDIKDYSHEELNNKIGYIPQKAVLFSGTIRSNMIFGESGQKQPDDQAIWDALELAQAKDFVQAKEDG
LETEVAQGGTNFSGGQRQRLAIARALARKPEMLIFDDSFSALDYKTDRILRQALNEKTGQMTKLIVAQRISTIMDADQIL
VLDQGQVVGQGTHKELLANNSVYQEIAYSQLSKEELDREN

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=262347 C0J00_RS04195 WP_104967702.1 797897..799699(+) (rcrP) [Streptococcus pluranimalium strain TH11417]
ATGTTTAAATTATTGAAATATTTAAATGGTAAAGAGTGGGCGATGATTGCCCTATCTACCGTTTTTATTTGTTTAGCTGT
CTGGATGGATATTGAAACACCAGCCTATATGTCAGATATTACCAAGTTACTTCAGGAAAAAGGAACAAGGACAGCTGATA
TTATGGAACCGGGTTGGAAAATGCTTGGTTTGTCTTTAGGCAGTTTTATCATGGCAGTTTGTGTCGGTTTTTTGGCAGCT
CGAACAGCAGCTAGTTTTACGACGCGTTTGCGTTCCGAAATTTTCAATCAGGTTATGGATTATTCCGATGCTGAGATCAA
ACAATTCTCCGTACCAAGCCTCTTAACCAGAACAACCAATGACCTAACGCAGTTACAAATTTTAATTACCATGGGTATGC
AGGTAGTAACACGTGGTCCTATTATGGCAATCTGGGCCTTGACCAAGATTTGGGGTAAAAGTAGTGAGTGGACCTGGTCC
GTTGCTATTGCGGTTGCAGTAGTCATGCTCTTGTTAGCAACTCTTTTGATTTTTGCTTTTCCGCGTTTACAAAAGGTCCA
AAAATACACTGATGGGCTTAATGCAACCATGCGTGAAATTTTATCAGGGATTCGCGTTGTCCGAGCCTATAATGCTGAAG
ACTATCAAGATGCAAAATTTTCAGAGCAAAACCTAGCTCTGACTCGTCTGAATCTTTTTGTCAGTCGCCTATTTGCCTTG
ATGAATCCAGTCATGACAGTAGTTTCCAGTGGTTTGACCTTGGCTATTTATTGGATTGGGGCTCAGATGATTGATAATAT
CGCTATCAAGATGACGTCAAGGGCAGCTGCTATGGCTAGCGTTCAAGACAGAATCTCTGTTTTTAGTGATATGGTTGTTT
TTTCATCCTACGCTATGCAAGTTGTCATGGGCTTTATGATGATGGTCGCTATCTTTATTATCCTACCGCGTGCCTTGGTG
TCAGCAGGGCGGATTAATGAAGTGCTTTCTTTGGAACCAAGCATTATCTTCAAGAAAACATCAACTGAGAAATTAGTTGA
AAAAGGCCAAGTAGAATACCGAAATGTTACCTTCAAATATGCCCAAGAATCAGAAGCAGTTGTCGAAAATATCTCCTTCA
AAGCTAGTGCAGGTCAAACGATTGCCTTTATCGGGTCAACTGGTTCTGGTAAAACAAGTTTGGTTAAACTTTTACCACGT
TTTTATGATGTTACGTCAGGACAGATTTTAGTTGATGGTATTGATATTAAGGATTACAGTCATGAGGAACTCAATAATAA
AATTGGTTATATCCCTCAGAAAGCTGTACTCTTTAGTGGAACTATTCGCTCTAACATGATCTTTGGTGAGAGCGGTCAAA
AACAACCAGATGATCAAGCTATTTGGGATGCGCTAGAATTGGCTCAAGCTAAAGACTTTGTCCAGGCTAAAGAAGACGGA
CTTGAGACGGAAGTGGCACAAGGTGGAACAAATTTCTCTGGTGGTCAACGCCAACGATTGGCGATTGCGCGTGCCCTTGC
TCGTAAACCGGAAATGTTGATTTTTGACGATTCCTTCTCTGCCCTTGATTACAAGACGGATCGTATTTTGCGTCAGGCCT
TAAATGAAAAAACGGGACAGATGACCAAACTCATTGTTGCTCAAAGGATTTCAACCATTATGGATGCGGACCAAATCTTA
GTATTGGATCAAGGTCAGGTTGTTGGTCAAGGCACTCATAAGGAACTTTTGGCAAACAATAGCGTTTACCAAGAAATTGC
CTATTCACAATTATCTAAGGAGGAATTGGACCGTGAAAACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-266)

ABC transporter (ABC_tran)

(369-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0D466

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

73.199

99.5

0.728

Multiple sequence alignment